RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 H3BNH8 94 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 STX11O75558 287 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
COPS3-201ENST00000268717 OXSR1O95747 527 aaPredicted RBP14.28□□□□□ -0.12
COPS3-201ENST00000268717 FBLP22087 321 aaKnown RBP14.28□□□□□ -0.12
COPS3-201ENST00000268717 RPS4Y1P22090 263 aaKnown RBP14.28□□□□□ -0.12
COPS3-201ENST00000268717 DUSP8Q13202 625 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 CAMK2BQ13554 666 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 TRA2AQ13595 282 aaKnown RBP eCLIP14.28□□□□□ -0.12
COPS3-201ENST00000268717 EIPR1Q53HC9 387 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 DCST2Q5T1A1 773 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 TYW3Q6IPR3 259 aaKnown RBP14.28□□□□□ -0.12
COPS3-201ENST00000268717 RHBDD2Q6NTF9 364 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 TMPRSS9Q7Z410 1059 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 PEX5LQ8IYB4 626 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 C8orf59Q8N0T1 100 aaPredicted RBP14.28□□□□□ -0.12
COPS3-201ENST00000268717 COX18Q8N8Q8 333 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 SIMC1Q8NDZ2 872 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 OR7G1Q8NGA0 311 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 OR10G2Q8NGC3 310 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 OR52R1Q8NGF1 315 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 GABARAPL3Q9BY60 117 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 MRPS26Q9BYN8 205 aaKnown RBP14.28□□□□□ -0.12
COPS3-201ENST00000268717 ZNF304Q9HCX3 659 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 KRT84Q9NSB2 600 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 KLHL28Q9NXS3 571 aa14.28□□□□□ -0.12
COPS3-201ENST00000268717 HEMK1Q9Y5R4 338 aaPredicted RBP14.28□□□□□ -0.12
COPS3-201ENST00000268717 LOC100130705A0A1B0GUX0 176 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 A0A1W2PRQ8 180 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 J3KTA2 159 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 FFAR1O14842 300 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 KIAA0513O60268 411 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 ZIC2O95409 532 aaPredicted RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 EPPINO95925 133 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 SMIM18P0DKX4 95 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 ALAS2P22557 587 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 RYKP34925 604 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 EMDP50402 254 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 POU6F2P78424 691 aaPredicted RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 BTG2P78543 158 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 ZNF155Q12901 538 aaPredicted RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 APOFQ13790 326 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 DGCR6Q14129 220 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 LARS2Q15031 903 aaKnown RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 EXOC3L2Q2M3D2 409 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 ZIK1Q3SY52 487 aaPredicted RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 CYP27C1Q4G0S4 372 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 DGAT2L6Q6ZPD8 337 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 THAP5Q7Z6K1 395 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 BPHLQ86WA6 291 aaPredicted RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 CACTIN-AS1Q8N1I8 211 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 ZNF619Q8N2I2 560 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 LINC00471Q8N535 108 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 OR52P1PQ8NH57 321 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 PRRC1Q96M27 445 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 VSTM2LQ96N03 204 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 GRIP2Q9C0E4 1043 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 MKKSQ9NPJ1 570 aaPredicted RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 NDOR1Q9UHB4 597 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 SLC13A4Q9UKG4 626 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 ATXN7L1Q9ULK2 861 aaPredicted RBP14.27□□□□□ -0.12
COPS3-201ENST00000268717 ZNF232Q9UNY5 417 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 POFUT2Q9Y2G5 429 aa14.27□□□□□ -0.12
COPS3-201ENST00000268717 CELSR3Q9NYQ7 3312 aa14.27□□□□□ -0.13
COPS3-201ENST00000268717 ADAMTS20P59510 1910 aa14.27□□□□□ -0.13
COPS3-201ENST00000268717 MYOCOSA0A1B0GUC4 107 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 TMEM8BA6NDV4 472 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 AGAP5A6NIR3 686 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 FAAHO00519 579 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 NTN3O00634 580 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 CCNB2O95067 398 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 DBIP07108 87 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 H1F0P07305 194 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 MAOAP21397 527 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 PIGAP37287 484 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 EXOSC7Q15024 291 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 LIN52Q52LA3 116 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 TTC33Q6PID6 262 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 TAGAPQ8N103 731 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 PARP8Q8N3A8 854 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 METTL27Q8N6F8 245 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 KDF1Q8NAX2 398 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 SETD9Q8NE22 299 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 OR4D11Q8NGI4 311 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 OIT3Q8WWZ8 545 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 MUS81Q96NY9 551 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 ALPK1Q96QP1 1244 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 POLR2J2Q9GZM3 115 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 TGIF2Q9GZN2 237 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 POLR2J3Q9H1A7 115 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 ANKRD19PQ9H560 264 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 NMNAT1Q9HAN9 279 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 FOLH1BQ9HBA9 442 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 NECTIN3Q9NQS3 549 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 SIDT1Q9NXL6 827 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 TUBA8Q9NY65 449 aaPredicted RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 DHCR7Q9UBM7 475 aaKnown RBP14.26□□□□□ -0.13
COPS3-201ENST00000268717 PRODH2Q9UF12 536 aa14.26□□□□□ -0.13
COPS3-201ENST00000268717 A4GNTQ9UNA3 340 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms