RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SENP5Q96HI0 755 aaPredicted RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 FUZQ9BT04 418 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 ZNF696Q9H7X3 374 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 APMAPQ9HDC9 416 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 PNPLA3Q9NST1 481 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 PRODH2Q9UF12 536 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 ZNF232Q9UNY5 417 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 ORC6Q9Y5N6 252 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 RALGAPA1Q6GYQ0 2036 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 COL27A1Q8IZC6 1860 aaPredicted RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 PCDH17O14917 1159 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 MITFO75030 526 aaPredicted RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 DDAH2O95865 285 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 DBIP07108 87 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 CT45A8P0DMV1 189 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 CT45A9P0DMV2 189 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 SMIM11AP58511 58 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 DCDP81605 110 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 GANABQ14697 944 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 LARS2Q15031 903 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 MAPK14Q16539 360 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 CT45A2Q5DJT8 189 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 MFSD4BQ5TF39 518 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 KRT80Q6KB66 452 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 TMEM154Q6P9G4 183 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 DEF8Q6ZN54 512 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 LAPTM4BQ86VI4 370 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 CLIP4Q8N3C7 705 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 ATG16L2Q8NAA4 619 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 SUMF1Q8NBK3 374 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 OR52J3Q8NH60 311 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 STT3BQ8TCJ2 826 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 BATF3Q9NR55 127 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 PNO1Q9NRX1 252 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 SCOCQ9UIL1 159 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 KCNE5Q9UJ90 142 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 GPR55Q9Y2T6 319 aaPredicted RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 CENPVL1A0A0U1RR11 272 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 EIF4E1BA6NMX2 242 aaKnown RBP15.18■□□□□ 0.02
TPM1-201ENST00000267996 EFCAB7A8K855 629 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 TNFAIP8O95379 198 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 CLIC3O95833 236 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 H1F0P07305 194 aaKnown RBP15.18■□□□□ 0.02
TPM1-201ENST00000267996 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 ANXA8P13928 327 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 PIGAP37287 484 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 SLC37A1P57057 533 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 MC2RQ01718 297 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 SF3A2Q15428 464 aaKnown RBP15.18■□□□□ 0.02
TPM1-201ENST00000267996 GPR68Q15743 365 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 ZNF770Q6IQ21 691 aaPredicted RBP15.18■□□□□ 0.02
TPM1-201ENST00000267996 FIGNL1Q6PIW4 674 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 ZNF836Q6ZNA1 936 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 OVCH1Q7RTY7 1134 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 TSPYL5Q86VY4 417 aaPredicted RBP15.18■□□□□ 0.02
TPM1-201ENST00000267996 SLC5A8Q8N695 610 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 ZSCAN1Q8NBB4 408 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 NR4A3Q92570 626 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 RMND5BQ96G75 393 aaPredicted RBP15.18■□□□□ 0.02
TPM1-201ENST00000267996 PRRC1Q96M27 445 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 ALPK1Q96QP1 1244 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 FEVQ99581 238 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 CACYBPQ9HB71 228 aaKnown RBP15.18■□□□□ 0.02
TPM1-201ENST00000267996 KLHL28Q9NXS3 571 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 RHCGQ9UBD6 479 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 SLC13A4Q9UKG4 626 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 MKL2Q9ULH7 1088 aa15.18■□□□□ 0.02
TPM1-201ENST00000267996 A0A1W2PRQ8 180 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 VSTM2BA6NLU5 285 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 DYRK3O43781 588 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 TPST2O60704 377 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 IGKV1D-16P01601 117 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 ZGLP1P0C6A0 271 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 NID1P14543 1247 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 IL7RP16871 459 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 CBLP22681 906 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 CCKBRP32239 447 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 DGCR6Q14129 220 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 NSDHLQ15738 373 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 LIN52Q52LA3 116 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 RNF220Q5VTB9 566 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 ZAR1Q86SH2 424 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 ZNF555Q8NEP9 628 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 OR14A16Q8NHC5 309 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 ZNF721Q8TF20 911 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 CLIP3Q96DZ5 547 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 SLC46A1Q96NT5 459 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 MUS81Q96NY9 551 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 GRIP2Q9C0E4 1043 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 Q9N2J8 555 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 FBXO8Q9NRD0 319 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 KRT84Q9NSB2 600 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 RXFP3Q9NSD7 469 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 C14orf105Q9NVL8 296 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 RLIMQ9NVW2 624 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 KIF17Q9P2E2 1029 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 CLCA3PQ9Y6N3 262 aa15.17■□□□□ 0.02
TPM1-201ENST00000267996 TRBV4-1A0A0J9YWV2 114 aa15.16■□□□□ 0.02
TPM1-201ENST00000267996 LOC100130705A0A1B0GUX0 176 aa15.16■□□□□ 0.02
TPM1-201ENST00000267996 PRR33A8MZF0 331 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms