RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ADAMTS16Q8TE57 1224 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 ASB15Q8WXK1 588 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 TAMM41Q96BW9 452 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 SENP5Q96HI0 755 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 CNIH4Q9P003 139 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 ADAM30Q9UKF2 790 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 SPIN1Q9Y657 262 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF726A6NNF4 738 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 AIREO43918 545 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 NSA2O95478 260 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 TMEM236Q5W0B7 351 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 ALKBH2Q6NS38 261 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 TMEM64Q6YI46 380 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 CACTIN-AS1Q8N1I8 211 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 ERMAPQ96PL5 475 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 PIGUQ9H490 435 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 CROCCQ5TZA2 2017 aa13.53□□□□□ -0.24
PDLIM2-201ENST00000265810 TRBV11-1A0A0K0K1C0 115 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 NUDT21O43809 227 aaKnown RBP13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 HSD17B7P56937 341 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 PHC1P78364 1004 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 PON3Q15166 354 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 TIGD6Q17RP2 521 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 SFTPA2Q8IWL1 248 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 AMER3Q8N944 861 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 SGTBQ96EQ0 304 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 NUDT22Q9BRQ3 303 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 IER2Q9BTL4 223 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 GRHPRQ9UBQ7 328 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 R4GN57 208 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 RNF13O43567 381 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 DENRO43583 198 aaKnown RBP13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 PRAMEF4O60810 478 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 SLITRK5O94991 958 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 PRAMEF9Q5VWM5 478 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 KBTBD2Q8IY47 623 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 WDR34Q96EX3 536 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 PRDM7Q9NQW5 492 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 NANSQ9NR45 359 aa13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.24
PDLIM2-201ENST00000265810 CASKO14936 926 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 APOL3O95236 402 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 BTG2P78543 158 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 HDAC2Q92769 488 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 TMEM38AQ9H6F2 299 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 UNC13CQ8NB66 2214 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 OR2W5A6NFC9 320 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 PCDH17O14917 1159 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 PPM1BO75688 479 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 GPR3P46089 330 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 RAE1P78406 368 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 PMS2P3Q13401 168 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 MAPK11Q15759 364 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 GUSBP11Q6P575 273 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 PAPD4Q6PIY7 484 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 ZNF793Q6ZN11 406 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 OR14A16Q8NHC5 309 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 CNRIP1Q96F85 164 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 CSF3RQ99062 836 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 POLDIP3Q9BY77 421 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 MMACHCQ9Y4U1 282 aa13.52□□□□□ -0.25
PDLIM2-201ENST00000265810 NPIPA5E9PKD4 350 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 OR5F1O95221 314 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 FUCA1P04066 466 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 HK1P19367 917 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 MYL9P24844 172 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 MPLP40238 635 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 MRPL2Q5T653 305 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 OR5M10Q6IEU7 315 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 TMEM71Q6P5X7 295 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 GPAT4Q86UL3 456 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 CA13Q8N1Q1 262 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 LIN28AQ9H9Z2 209 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 FOLH1BQ9HBA9 442 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 HPF1Q9NWY4 346 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 NPIPA1Q9UND3 350 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 IGHV3-20A0A0C4DH32 117 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 SLC30A4O14863 429 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 ADORA3P0DMS8 318 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 PDX1P52945 283 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 STARD6P59095 220 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 TRIM16LQ309B1 348 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 OR8J1Q8NGP2 316 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 FCGR1BQ92637 280 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 MARCH7Q9H992 704 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 UBQLN4Q9NRR5 601 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 HEMK1Q9Y5R4 338 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 NSG1A0A0A6YYJ2 146 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 ZFAND5O76080 213 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 CD36P16671 472 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 CNR2P34972 360 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 CCL7P80098 99 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 SLCO6A1Q86UG4 719 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 IQCF1Q8N6M8 205 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 DPH1Q9BZG8 443 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 PADI1Q9ULC6 663 aa13.51□□□□□ -0.25
PDLIM2-201ENST00000265810 IGHV5-51A0A0C4DH38 117 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms