RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 LRRN3Q9H3W5 708 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 SYNPO2LQ9H987 977 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 COL4A3Q01955 1670 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 A0A1B0GTQ1 180 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 C2orf92A0A1B0GVN3 265 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 A0A1B0GX78 115 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 GXYLT2A0PJZ3 443 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 ARHGAP33O14559 1287 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 YKT6O15498 198 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 SLC25A12O75746 678 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 IFI30P13284 250 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 CENPAP49450 140 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 RGS19P49795 217 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 EMP2P54851 167 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 NPTX1Q15818 432 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 TCEAL6Q6IPX3 200 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 NLGN4XQ8N0W4 816 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 DNAJC22Q8N4W6 341 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 AGBL5Q8NDL9 886 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 ATP6V1C2Q8NEY4 427 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 OR1L3Q8NH93 324 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 TCEAL3Q969E4 200 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 DGCR14Q96DF8 476 aaKnown RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 PHOX2BQ99453 314 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 SDF2Q99470 211 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 LPAR4Q99677 370 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 BTBD2Q9BX70 525 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 NRSN2Q9GZP1 204 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 LIN28AQ9H9Z2 209 aaKnown RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 CXorf21Q9HAI6 301 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 CNIH4Q9P003 139 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 HEMK1Q9Y5R4 338 aaPredicted RBP8.69□□□□□ -1.02
SSR3-201ENST00000265044 FANCMQ8IYD8 2048 aa8.69□□□□□ -1.02
SSR3-201ENST00000265044 IGHV3-20A0A0C4DH32 117 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 CCDC163A0A0D9SF12 145 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 HCRTR2O43614 444 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 TLX2O43763 284 aaPredicted RBP8.68□□□□□ -1.02
SSR3-201ENST00000265044 GPR4P46093 362 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 MVDP53602 400 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 TOMM20Q15388 145 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 MED22Q15528 200 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 MRPL2Q5T653 305 aaKnown RBP8.68□□□□□ -1.02
SSR3-201ENST00000265044 TCEANCQ8N8B7 351 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 ORAI3Q9BRQ5 295 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 NCDNQ9UBB6 729 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 PEX12O00623 359 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 DNAJB5O75953 348 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 PABPC4LP0CB38 370 aaKnown RBP8.68□□□□□ -1.02
SSR3-201ENST00000265044 GSTT1P30711 240 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 MPLP40238 635 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 CRISP1P54107 249 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 PPP2R2BQ00005 443 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 PLCXD2Q0VAA5 305 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 GINS1Q14691 196 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 ENTPD8Q5MY95 495 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 RBM48Q5RL73 367 aaKnown RBP8.68□□□□□ -1.02
SSR3-201ENST00000265044 TMEM164Q5U3C3 297 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 TCTN3Q6NUS6 607 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 PODNL1Q6PEZ8 512 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 HSDL2Q6YN16 418 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 NRMQ8IXM6 262 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 SLC34A3Q8N130 599 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 OR4C6Q8NH72 309 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 FAM46AQ96IP4 442 aaKnown RBP8.68□□□□□ -1.02
SSR3-201ENST00000265044 NIPSNAP1Q9BPW8 284 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 TSSK6Q9BXA6 273 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 FOLH1BQ9HBA9 442 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 SLC24A3Q9HC58 644 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 CCNB1IP1Q9NPC3 277 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 CES1P1Q9UKY3 287 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 ZNF443Q9Y2A4 671 aaPredicted RBP8.68□□□□□ -1.02
SSR3-201ENST00000265044 MED31Q9Y3C7 131 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 COMMD3-BMI1R4GMX3 469 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 PRR19A6NJB7 356 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 H0YIG0 161 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 H3BSA7 217 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 SCO2O43819 266 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 GASTP01350 101 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 HIST1H2ABP04908 130 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 MYL12AP19105 171 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 MLLT10P55197 1068 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 NUP107P57740 925 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 NKAIN1Q4KMZ8 207 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 TYW3Q6IPR3 259 aaKnown RBP8.68□□□□□ -1.02
SSR3-201ENST00000265044 HIST3H2AQ7L7L0 130 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 CLIP4Q8N3C7 705 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 OR51A7Q8NH64 312 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 B4GALNT2Q8NHY0 566 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 HIST1H2ACQ93077 130 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 SLC41A3Q96GZ6 507 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 C7orf34Q96L11 122 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 ZNF681Q96N22 645 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 CMKLR1Q99788 373 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 ZNF696Q9H7X3 374 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 ERVMER34-1Q9H9K5 563 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 CBLCQ9ULV8 474 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 SLC7A7Q9UM01 511 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 TECTAO75443 2155 aa8.68□□□□□ -1.02
SSR3-201ENST00000265044 ELOA3DA6NLF2 546 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms