RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MRPL9Q9BYD2 267 aaKnown RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ZDHHC6Q9H6R6 413 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ELAC1Q9H777 363 aaKnown RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 TRIM36Q9NQ86 728 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 HCN3Q9P1Z3 774 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC13A4Q9UKG4 626 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 POMT2Q9UKY4 750 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ACSL5Q9ULC5 683 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 A0A087WUU8 490 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 LRRN3E7EW58 273 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 PGRMC2O15173 223 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 PI15O43692 258 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ASGR1P07306 291 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ACSM4P0C7M7 580 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 OR1D2P34982 312 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 FRKP42685 505 aaPredicted RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 CAPZA2P47755 286 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 KHKP50053 298 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 RPS7P62081 194 aaKnown RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 OPCMLQ14982 345 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 MLC1Q15049 377 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 SYPL1Q16563 259 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ST3GAL2Q16842 350 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 VASNQ6EMK4 673 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 C3P1Q6ZMU1 363 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 DEFB132Q7Z7B7 95 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 SIAH3Q8IW03 269 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 OR9A1PQ8NGU1 263 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 LINC01599Q8WXQ3 324 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 SCAMP4Q969E2 229 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 DPYSL5Q9BPU6 564 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 WFDC6Q9BQY6 131 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 LRRN3Q9H3W5 708 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 SDHAF2Q9NX18 166 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 AKAP7Q9P0M2 348 aaPredicted RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 NFKBIL1Q9UBC1 381 aaPredicted RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 TMEM5Q9Y2B1 443 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 NPFFR2Q9Y5X5 522 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 CCDC88CQ9P219 2028 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 PPM1BO75688 479 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 FGBP02675 491 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 PAICSP22234 425 aaKnown RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 THBS2P35442 1172 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SRP9P49458 86 aaKnown RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 PCBP4P57723 403 aaKnown RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 TAS2R43P59537 309 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 ST3GAL3Q11203 375 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SNTB2Q13425 540 aaKnown RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 INSL4Q14641 139 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 CXXC5Q7LFL8 322 aaKnown RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 OR8D4Q8NGM9 314 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SUN3Q8TAQ9 357 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 ST8SIA4Q92187 359 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 HSD17B8Q92506 261 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 TM4SF18Q96CE8 201 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 AHCYL2Q96HN2 611 aaKnown RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 C12orf66Q96MD2 445 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 FAIM2Q9BWQ8 316 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 OR51I1Q9H343 314 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SLAMF7Q9NQ25 335 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 INPP5EQ9NRR6 644 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SIRT3Q9NTG7 399 aaPredicted RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 TRPC4Q9UBN4 977 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 HS3ST2Q9Y278 367 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 BACE2Q9Y5Z0 518 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 A0A0G2JPF8 293 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 HNRNPCL3B7ZW38 293 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SYT5O00445 386 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 GSTZ1O43708 216 aaPredicted RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 PEX14O75381 377 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 STX11O75558 287 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 TGM6O95932 706 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 HNRNPCL4P0DMR1 293 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 FPR3P25089 353 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 BUD31P41223 144 aaPredicted RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 MAP2K6P52564 334 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 BLVRAP53004 296 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 CCL23P55773 120 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 TSPAN5P62079 268 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 NHLRC3Q5JS37 347 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 FAM69AQ5T7M9 428 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 PRAMEF8Q5VWM4 474 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 PRAMEF7Q5VXH5 474 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 FAM198BQ6UWH4 519 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 KIAA1324Q6UXG2 1013 aaKnown RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 CHMP1BQ7LBR1 199 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 MMP21Q8N119 569 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 CPXM2Q8N436 756 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 ZBTB44Q8NCP5 570 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 YIPF5Q969M3 257 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SGTBQ96EQ0 304 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 SHARPINQ9H0F6 387 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 HMX1Q9NP08 348 aaPredicted RBP11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 ABRACLQ9P1F3 81 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 PFDN2Q9UHV9 154 aa11.62□□□□□ -0.55
CHMP2B-201ENST00000263780 KIAA1671Q9BY89 1806 aa11.61□□□□□ -0.55
CHMP2B-201ENST00000263780 MFSD2BA6NFX1 497 aa11.61□□□□□ -0.55
CHMP2B-201ENST00000263780 A8MUA0 341 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms