RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PRAMEF25A6NGN4 478 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 G3V3Y1 287 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 ZCCHC18P0CG32 403 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 HPGDP15428 266 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 ELAVL4P26378 380 aaKnown RBP17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 LSP1P33241 339 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 MAGEA8P43361 318 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 KHKP50053 298 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 PPIAP62937 165 aaKnown RBP17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 GNGT1P63211 74 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 ZNF324BQ6AW86 544 aaPredicted RBP17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 ST6GALNAC3Q8NDV1 305 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 TSPEARQ8WU66 669 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 VPS33AQ96AX1 596 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 OR7D2Q96RA2 312 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 SLX1AQ9BQ83 275 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 TTTY12Q9BZ98 90 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 TRIM4Q9C037 500 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 ZFP64Q9NPA5 681 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 ABCG2Q9UNQ0 655 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 BSNQ9UPA5 3926 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 BAHCC1Q9P281 2608 aa17.2■□□□□ 0.34
CYSTM1-201ENST00000261811 NCKAP5O14513 1909 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 GXYLT2A0PJZ3 443 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 NPIPA5E9PKD4 350 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 ASNA1O43681 348 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 KCNK2O95069 426 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 CYP4B1P13584 511 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 SAXO2Q658L1 398 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 C16orf62Q7Z3J2 963 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 OR1J4Q8NGS1 313 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 MIPOL1Q8TD10 442 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 CDS1Q92903 461 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 TMEM41AQ96HV5 264 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 NODALQ96S42 347 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 INPP5KQ9BT40 448 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 HOXD1Q9GZZ0 328 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 RAD21L1Q9H4I0 556 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 TUBA8Q9NY65 449 aaPredicted RBP17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 NPIPA1Q9UND3 350 aa17.19■□□□□ 0.34
CYSTM1-201ENST00000261811 DNAJC13O75165 2243 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 A0A1W2PP18 115 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 NBASA2RRP1 2371 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 ANKUB1A6NFN9 424 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 ANGPT2O15123 496 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 CCDC22O60826 627 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 ICOSLGO75144 302 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 GSNP06396 782 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 ADSLP30566 484 aaPredicted RBP17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 RFC3P40938 356 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 ZFP36L2P47974 494 aaKnown RBP17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 FASNP49327 2511 aaKnown RBP17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 MAPRE2Q15555 327 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 IGFBP7Q16270 282 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 HYAL4Q2M3T9 481 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 EXOSC6Q5RKV6 272 aaKnown RBP17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 CGB2Q6NT52 195 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 GFRALQ6UXV0 394 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 FUNDC1Q8IVP5 155 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 GHDCQ8N2G8 530 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 FAM109AQ8N4B1 249 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 ZNF527Q8NB42 609 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 GPR137Q96N19 417 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 SMG1Q96Q15 3661 aaKnown RBP17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 PHF12Q96QT6 1004 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 TBL1XR1Q9BZK7 514 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 OR51I1Q9H343 314 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 SERHLQ9NQF3 203 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 QPCTLQ9NXS2 382 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 LEF1Q9UJU2 399 aaPredicted RBP17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 NDUFAF1Q9Y375 327 aa17.18■□□□□ 0.34
CYSTM1-201ENST00000261811 A0A096LPI6 279 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 TRIM3O75382 744 aaPredicted RBP17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 PPIBP23284 216 aaKnown RBP17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 EVI2BP34910 448 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 HPCAP84074 193 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 SF3A3Q12874 501 aaKnown RBP eCLIP17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 SLC10A1Q14973 349 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 DCST2Q5T1A1 773 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 FIGNL1Q6PIW4 674 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 DNAJC14Q6Y2X3 702 aaPredicted RBP17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 SPATA21Q7Z572 469 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 CLEC4FQ8N1N0 589 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 FAM110BQ8TC76 370 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 XAGE5Q8WWM1 108 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 GTF2H4Q92759 462 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 OTUB1Q96FW1 271 aaPredicted RBP17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 ELAC2Q9BQ52 826 aaKnown RBP17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 FAM107BQ9H098 131 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 UBQLN4Q9NRR5 601 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 THUMPD1Q9NXG2 353 aaKnown RBP17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 WIF1Q9Y5W5 379 aa17.17■□□□□ 0.34
CYSTM1-201ENST00000261811 ZNF407Q9C0G0 2248 aa17.16■□□□□ 0.34
CYSTM1-201ENST00000261811 A0A0G2JMM0 328 aa17.16■□□□□ 0.34
CYSTM1-201ENST00000261811 A0A1W2PPB8 328 aa17.16■□□□□ 0.34
CYSTM1-201ENST00000261811 A0A1W2PRS3 328 aa17.16■□□□□ 0.34
CYSTM1-201ENST00000261811 PINLYPA6NC86 204 aa17.16■□□□□ 0.34
CYSTM1-201ENST00000261811 TMEM247A6NEH6 219 aa17.16■□□□□ 0.34
CYSTM1-201ENST00000261811 FAM166BA8MTA8 275 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms