RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 B3GNT3Q9Y2A9 372 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 ITGB4P16144 1822 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 SOBPA7XYQ1 873 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 C1orf196B1AJZ1 125 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 FAM155AB1AL88 458 aaPredicted RBP13.55□□□□□ -0.24
CUX2-201ENST00000261726 HPRP00739 348 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 IFNA17P01571 189 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 LPLP06858 475 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 RCAN2Q14206 197 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 KLHDC8AQ8IYD2 350 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 SYT14Q8NB59 555 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 VSX1Q9NZR4 365 aaPredicted RBP13.55□□□□□ -0.24
CUX2-201ENST00000261726 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
CUX2-201ENST00000261726 GPR37L1O60883 481 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 IGSF21Q96ID5 467 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 BMFQ96LC9 184 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 DPH1Q9BZG8 443 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 TSPAN10Q9H1Z9 355 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 GPATCH2Q9NW75 528 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SLC7A7Q9UM01 511 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 MARF1Q9Y4F3 1742 aaKnown RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 CENPBD1B2RD01 187 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SDHDO14521 159 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 TAS2R20P59543 309 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 TP53I3Q53FA7 332 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 FIGLAQ6QHK4 219 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 TMEM19Q96HH6 336 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 PRDM9Q9NQV7 894 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ARPC5O15511 151 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 GK2Q14410 553 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 FAM83HQ6ZRV2 1179 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 MRPL41Q8IXM3 137 aaKnown RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 IL1F10Q8WWZ1 152 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SLAMF9Q96A28 289 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ADAMTS10Q9H324 1103 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 APMAPQ9HDC9 416 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 VDAC3Q9Y277 283 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 PIGBOS1A0A0B4J2F0 54 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 BOLA2-SMG1P6H3BVE0 249 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ZNF780AO75290 641 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 STK17BO94768 372 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SLC34A2O95436 690 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 MSR1P21757 451 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 CLCN2P51788 898 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 RPP30P78346 268 aaKnown RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 TAP2Q03519 686 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 MELKQ14680 651 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 C3orf38Q5JPI3 329 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 KDELC1Q6UW63 502 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 LANCL3Q6ZV70 420 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ECHDC3Q96DC8 303 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SIGLEC10Q96LC7 697 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 TEPSINQ96N21 525 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SFXN1Q9H9B4 322 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ARMC1Q9NVT9 282 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ADAMTS6Q9UKP5 1117 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SERPINE2P07093 398 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 DRD2P14416 443 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 TMEM11P17152 192 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 OR52W1Q6IF63 320 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 SGPP2Q8IWX5 399 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ZNF808Q8N4W9 903 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 CNOT9Q92600 299 aaKnown RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 SENP5Q96HI0 755 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 TXNDC15Q96J42 360 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 ZNF578Q96N58 590 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
CUX2-201ENST00000261726 FKRPQ9H9S5 495 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 DZANK1Q9NVP4 752 aa13.54□□□□□ -0.24
CUX2-201ENST00000261726 RETP07949 1114 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 PTPRRQ15256 657 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 BIN3Q9NQY0 253 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 SLIT2O94813 1529 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 LIPCP11150 499 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 ADARB1P78563 741 aaKnown RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 GRM7Q14831 915 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 CIDECQ96AQ7 238 aaPredicted RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 SMIM3Q9BZL3 60 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 TAS2R8Q9NYW2 309 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 LRP6O75581 1613 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 SC5DO75845 299 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 DBHP09172 617 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 SCAPQ12770 1279 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 COG8Q96MW5 612 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 CCM2LQ9NUG4 571 aaPredicted RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 ZNF223Q9UK11 482 aaPredicted RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 MED16Q9Y2X0 877 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 F5H5P2 479 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 K7ERQ8 282 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 PRICKLE3O43900 615 aaPredicted RBP13.53□□□□□ -0.24
CUX2-201ENST00000261726 AK1P00568 194 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 SYPP08247 313 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 NCS1P62166 190 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 ARG2P78540 354 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 OR4D1Q15615 310 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 LCN10Q6JVE6 187 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 SHISA6Q6ZSJ9 500 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 USP54Q70EL1 1684 aa13.53□□□□□ -0.24
CUX2-201ENST00000261726 CHDHQ8NE62 594 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms