RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 CNKSR3Q6P9H4 555 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 FIGNL1Q6PIW4 674 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 MSANTD1Q6ZTZ1 278 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 BCDIN3DQ7Z5W3 292 aaKnown RBP12.3□□□□□ -0.44
TMEM260-201ENST00000261556 NUDT13Q86X67 352 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF280BQ86YH2 543 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 OR14K1Q8NGZ2 314 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF461Q8TAF7 563 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 RNF31Q96EP0 1072 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 UPK3BL1B0FP48 263 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 UPK3BL2E5RIL1 263 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 HSPA12AO43301 675 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 IL1AP01583 271 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 SELLP14151 372 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 HTR6P50406 440 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 AFF3P51826 1226 aaKnown RBP12.3□□□□□ -0.44
TMEM260-201ENST00000261556 VLDLRP98155 873 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 CACNG1Q06432 222 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF674Q2M3X9 581 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 POMZP3Q6PJE2 187 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 PAQR3Q6TCH7 311 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 VITQ6UXI7 678 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 GDPGP1Q6ZNW5 385 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ACBD4Q8NC06 268 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 OR11H7Q8NGC8 314 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 HAVCR2Q8TDQ0 301 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 TM9SF4Q92544 642 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 SMOQ99835 787 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ZDHHC4Q9NPG8 344 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 VNN3Q9NY84 501 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 FLVCR2Q9UPI3 526 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 LTBP4Q8N2S1 1624 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 RGS9O75916 674 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-201ENST00000261556 CSN2P05814 226 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 PITPNBP48739 271 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 MECP2P51608 486 aaKnown RBP12.3□□□□□ -0.44
TMEM260-201ENST00000261556 LUMP51884 338 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-201ENST00000261556 OR5M10Q6IEU7 315 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 PAQR6Q6TCH4 344 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ARL11Q969Q4 196 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 SDHCQ99643 169 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-201ENST00000261556 MGME1Q9BQP7 344 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 CRLF2Q9HC73 371 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF629Q9UEG4 869 aaPredicted RBP12.3□□□□□ -0.44
TMEM260-201ENST00000261556 ERVW-1Q9UQF0 538 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 SPEF2Q9C093 1822 aa12.3□□□□□ -0.44
TMEM260-201ENST00000261556 APC2O95996 2303 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TMEM72A0PK05 275 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 H7C0S8 307 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 OR7A17O14581 309 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TSPAN12O95859 305 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 IFNA17P01571 189 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 HTRA3P83110 453 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 ABHD18Q0P651 414 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 KIAA0141Q14154 515 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-201ENST00000261556 ZNHIT3Q15649 155 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-201ENST00000261556 PGAP1Q75T13 922 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TMEM200AQ86VY9 491 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TGIF2LXQ8IUE1 241 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 ADGRG2Q8IZP9 1017 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 OR2L5Q8NG80 312 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 OR10R2Q8NGX6 335 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 CREB3L4Q8TEY5 395 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF649Q9BS31 505 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TDP1Q9NUW8 608 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TMEFF2Q9UIK5 374 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-201ENST00000261556 POLR1DQ9Y2S0 133 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 A0A0U1RQS6 177 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 WASH3PC4AMC7 463 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 FFAR2O15552 330 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 ECI2O75521 394 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 IL33O95760 270 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 C1QAP02745 245 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 RPS25P62851 125 aaKnown RBP12.29□□□□□ -0.44
TMEM260-201ENST00000261556 MICAQ29983 383 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 COQ5Q5HYK3 327 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 PRAMEF17Q5VTA0 474 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 GPR135Q8IZ08 494 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 KDF1Q8NAX2 398 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-201ENST00000261556 DNAAF1Q8NEP3 725 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 OR13C4Q8NGS5 318 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 SCMH1Q96GD3 660 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 BCO2Q9BYV7 579 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
TMEM260-201ENST00000261556 LATS1O95835 1130 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 PCCBP05166 539 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 RIDAP52758 137 aaKnown RBP12.29□□□□□ -0.44
TMEM260-201ENST00000261556 PITPNAQ00169 270 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 ZDHHC20Q5W0Z9 365 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TMEM220Q6QAJ8 160 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 GPR149Q86SP6 731 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 SLC30A8Q8IWU4 369 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 BEST3Q8N1M1 668 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 PROKR1Q8TCW9 393 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 SGK2Q9HBY8 427 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 RNF186Q9NXI6 227 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 TAS2R10Q9NYW0 307 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 FZD4Q9ULV1 537 aa12.29□□□□□ -0.44
TMEM260-201ENST00000261556 CXorf65A6NEN9 183 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms