RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 FAM180AQ6UWF9 173 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 LYPD8Q6UX82 237 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 RTL4Q6ZR62 310 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 FAM156AQ8NDB6 213 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 DUS3LQ96G46 650 aaKnown RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 LCORQ96JN0 433 aaPredicted RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 BARD1Q99728 777 aaKnown RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 DPY30Q9C005 99 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 GRIP2Q9C0E4 1043 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 NXF5Q9H1B4 397 aaKnown RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 KLF13Q9Y2Y9 288 aaPredicted RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 CCDC160A6NGH7 325 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 UPK1AO00322 258 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 IFI6P09912 130 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 ALDOCP09972 364 aaKnown RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 ATP6V1B1P15313 513 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 ZNF26P17031 533 aaPredicted RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 GPC1P35052 558 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 PPICP45877 212 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 ATP4BP51164 291 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 NRG3P56975 720 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 FOXK1P85037 733 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 SAMD4BQ5PRF9 694 aaKnown RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 DND1Q8IYX4 353 aaKnown RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 OR2L13Q8N349 312 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 METTL25Q8N6Q8 603 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 GOLM1Q8NBJ4 401 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 PSD4Q8NDX1 1056 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 SPACA9Q96E40 222 aaPredicted RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 MAGED4Q96JG8 741 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 OSBPL11Q9BXB4 747 aa15.45■□□□□ 0.06
SDCBP-201ENST00000260130 DDX18Q9NVP1 670 aaKnown RBP15.45■□□□□ 0.06
SDCBP-201ENST00000260130 A0A1W2PRB8 838 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 J3QKU1 62 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 COQ9O75208 318 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 FBXO45P0C2W1 286 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 DRD5P21918 477 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 SLC7A1P30825 629 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 MLC1Q15049 377 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 CAMKMTQ7Z624 323 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 BCORP1Q8N888 145 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 FAM98AQ8NCA5 519 aaKnown RBP15.44■□□□□ 0.06
SDCBP-201ENST00000260130 FAR1Q8WVX9 515 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 ZNF597Q96LX8 424 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 BHLHE41Q9C0J9 482 aaPredicted RBP15.44■□□□□ 0.06
SDCBP-201ENST00000260130 CCDC167Q9P0B6 97 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 PCDHGB4Q9UN71 923 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 GPR55Q9Y2T6 319 aaPredicted RBP15.44■□□□□ 0.06
SDCBP-201ENST00000260130 PCDHGB5Q9Y5G0 923 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 NPFFR2Q9Y5X5 522 aa15.44■□□□□ 0.06
SDCBP-201ENST00000260130 TCRBV3S1A0A5B6 114 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 KLRC4-KLRK1H3BQV0 150 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 FBP2O00757 339 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 MRASO14807 208 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 ANKRD28O15084 1053 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 NME6O75414 186 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 EFNA1P20827 205 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 STX1BP61266 288 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 TXNL4AP83876 142 aaKnown RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 PGS1Q32NB8 556 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 TMEM64Q6YI46 380 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 SULF2Q8IWU5 870 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 DNAJB8Q8NHS0 232 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 HSPBAP1Q96EW2 488 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 VSTM2LQ96N03 204 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 DUSP26Q9BV47 211 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 RBM38Q9H0Z9 239 aaKnown RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 FOLH1BQ9HBA9 442 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 AIG1Q9NVV5 245 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 A0A1B0GVG6 124 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 ACOX3O15254 700 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 CRYABP02511 175 aaKnown RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 CDK9P50750 372 aaKnown RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 PMP22Q01453 160 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 GK3PQ14409 553 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 NNATQ16517 81 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 PAOXQ6QHF9 649 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 CHERPQ8IWX8 916 aaKnown RBP15.43■□□□□ 0.06
SDCBP-201ENST00000260130 OR5P2Q8WZ92 322 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 ROPN1LQ96C74 230 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 PCDHAC1Q9H158 963 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 COQ10BQ9H8M1 238 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 TMEM181Q9P2C4 612 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 CD300AQ9UGN4 299 aa15.43■□□□□ 0.06
SDCBP-201ENST00000260130 ASPDHA6ND91 283 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 FRG2CA6NGY1 282 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 PYCARD-AS1I3L0S3 204 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 ERN1O75460 977 aaKnown RBP15.42■□□□□ 0.06
SDCBP-201ENST00000260130 CT45A8P0DMV1 189 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 CT45A9P0DMV2 189 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 ABCD3P28288 659 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 TMED10P49755 219 aaKnown RBP15.42■□□□□ 0.06
SDCBP-201ENST00000260130 NTRK2Q16620 822 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 LRRC23Q53EV4 343 aaPredicted RBP15.42■□□□□ 0.06
SDCBP-201ENST00000260130 CT45A2Q5DJT8 189 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 PRR22Q8IZ63 422 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 PCYOX1LQ8NBM8 494 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 C3orf14Q9HBI5 128 aa15.42■□□□□ 0.06
SDCBP-201ENST00000260130 VPS4AQ9UN37 437 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms