RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 KDM1BQ8NB78 822 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 TCEAL3Q969E4 200 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 COPZ2Q9P299 210 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 HTR3BO95264 441 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 H2AFB2P0C5Z0 115 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 CCR7P32248 378 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 SLC18B1Q6NT16 456 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 TMEM68Q96MH6 324 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 MAGED1Q9Y5V3 778 aaPredicted RBP17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 ANKRD12Q6UB98 2062 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 TRAPPC13A5PLN9 417 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 TIMP2P16035 220 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 PTH2RP49190 550 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 TMBIM6P55061 237 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 KATNBL1Q9H079 304 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 HIDE1A8MVS5 230 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 GPR37L1O60883 481 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 RP2O75695 350 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 HPRP00739 348 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 CASP6P55212 293 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 EIF2B1Q14232 305 aaKnown RBP17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 OR7A5Q15622 319 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 ABHD17BQ5VST6 288 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 SERINC2Q96SA4 455 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 SLC25A18Q9H1K4 315 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 VSX1Q9NZR4 365 aaPredicted RBP17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 TMEM9Q9P0T7 183 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 TMEM14AQ9Y6G1 99 aa17.67■□□□□ 0.42
SMARCC1-201ENST00000254480 A6NIN4 97 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 SNTB2Q13425 540 aaKnown RBP17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 C9orf135Q5VTT2 229 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 RIMS3Q9UJD0 308 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 LCATP04180 440 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 XCR1P46094 333 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 ACTA2P62736 377 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 ACTG2P63267 376 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 HMBOX1Q6NT76 420 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 MYRFLQ96LU7 910 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 LHPPQ9H008 270 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 IER3IP1Q9Y5U9 82 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 MYH15Q9Y2K3 1946 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 HMGB3O15347 200 aaKnown RBP17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 PITPNBP48739 271 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 CLDN10P78369 228 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 PELOQ9BRX2 385 aaKnown RBP17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 SDC1P18827 310 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 GSTM2P28161 218 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 ZNF45Q02386 682 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 GNMTQ14749 295 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 COL28A1Q2UY09 1125 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 ACOT4Q8N9L9 421 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 RCBTB1Q8NDN9 531 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 OR5AK2Q8NH90 309 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 MKS1Q9NXB0 559 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 VAPAQ9P0L0 249 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 ACAD8Q9UKU7 415 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 RAB11BQ15907 218 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 CTC1Q2NKJ3 1217 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 SERPINA12Q8IW75 414 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 OR52R1Q8NGF1 315 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 OR2T4Q8NH00 348 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 ZNF775Q96BV0 537 aaPredicted RBP17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 C3orf30Q96M34 536 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 ACPTQ9BZG2 426 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 DNTTIP1Q9H147 329 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 CUEDC1Q9NWM3 386 aaPredicted RBP17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 KLHL21Q9UJP4 597 aa17.66■□□□□ 0.42
SMARCC1-201ENST00000254480 HRGP04196 525 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 SSTR4P31391 388 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 SNRPD2P62316 118 aaKnown RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TMEM173Q86WV6 379 aaPredicted RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 EGLN2Q96KS0 407 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 FAM210AQ96ND0 272 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 MAP3K3Q99759 626 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TAS2R3Q9NYW6 316 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 PCDH10Q9P2E7 1040 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 UBE2J1Q9Y385 318 aaPredicted RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 AK6Q9Y3D8 172 aaKnown RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 ANTXRLA6NF34 631 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 OXSR1O95747 527 aaPredicted RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 UCHL1P09936 223 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 MLC1Q15049 377 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TMIGD2Q96BF3 282 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 RETREG1Q9H6L5 497 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 B4GAT1O43505 415 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 SYT7O43581 403 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 KNG1P01042 644 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 HMGN2P05204 90 aaKnown RBP17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 PNMTP11086 282 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 IRF2P14316 349 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 NTRK2Q16620 822 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 TCTE1Q5JU00 501 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 DCDC5Q6ZRR9 648 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 ANKK1Q8NFD2 765 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 MS4A4EQ96PG1 132 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 RDH14Q9HBH5 336 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 NLKQ9UBE8 527 aa17.65■□□□□ 0.42
SMARCC1-201ENST00000254480 POLR1CO15160 346 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms