RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 WDR55Q9H6Y2 383 aaPredicted RBP22.25■■□□□ 1.15
SDF2L1-201ENST00000248958 ABCG2Q9UNQ0 655 aa22.25■■□□□ 1.15
SDF2L1-201ENST00000248958 WIF1Q9Y5W5 379 aa22.25■■□□□ 1.15
SDF2L1-201ENST00000248958 PTPN13Q12923 2485 aa22.25■■□□□ 1.15
SDF2L1-201ENST00000248958 MYO7BQ6PIF6 2116 aa22.25■■□□□ 1.15
SDF2L1-201ENST00000248958 GOLGA8QA0A0J9YX86 632 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 GOLGA8OA6NCC3 632 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 GOLGA8NF8WBI6 632 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 CBR3O75828 277 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 CYP4B1P13584 511 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 PTPN6P29350 595 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 SPDYE7PQ495Y7 208 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 OR4F3Q6IEY1 312 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 WDR53Q7Z5U6 358 aaPredicted RBP22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 NEIL3Q8TAT5 605 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 PHF12Q96QT6 1004 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 STACQ99469 402 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 CXorf36Q9H7Y0 433 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 GALNT9Q9HCQ5 603 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 SDHAF3Q9NRP4 125 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 PCDHGB3Q9Y5G1 929 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 DNAJC13O75165 2243 aa22.24■■□□□ 1.15
SDF2L1-201ENST00000248958 NPIPA2E9PIF3 369 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 NPIPA3F8WFD2 350 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 ZG16O60844 167 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 TRAPPC6AO75865 159 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 SASH3O75995 380 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 HMGN2P05204 90 aaKnown RBP22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 ALDOCP09972 364 aaKnown RBP22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 LCN1P31025 176 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 EVI2BP34910 448 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 SMSP52788 366 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 EXOSC6Q5RKV6 272 aaKnown RBP22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 WLSQ5T9L3 541 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 NXNQ6DKJ4 435 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 TMEM211Q6ICI0 200 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 CDC73Q6P1J9 531 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 NUDT8Q8WV74 236 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 ACTRT3Q9BYD9 372 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 HHATLQ9HCP6 504 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 DUSP22Q9NRW4 184 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 FAM120CQ9NX05 1096 aaKnown RBP22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 USH1CQ9Y6N9 552 aa22.23■■□□□ 1.15
SDF2L1-201ENST00000248958 FREM3P0C091 2139 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 DIDO1Q9BTC0 2240 aaKnown RBP22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 PRSS51A0A1B0GVH4 220 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 E9PBE3 544 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 ZNHIT1O43257 154 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 TGDSO95455 350 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 ACP2P11117 423 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 GP1BBP13224 206 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 IDO1P14902 403 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 S100A3P33764 101 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 WNT3P56703 355 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 HBA1P69905 142 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 LASP1Q14847 261 aaKnown RBP22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 TOMM20Q15388 145 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 GXYLT1Q4G148 440 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 PLCZ1Q86YW0 608 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 ZNF808Q8N4W9 903 aaPredicted RBP22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 COX18Q8N8Q8 333 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 GLB1L3Q8NCI6 653 aaPredicted RBP22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 SLC16A11Q8NCK7 471 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 PIK3R3Q92569 461 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 RMND5BQ96G75 393 aaPredicted RBP22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 PIGUQ9H490 435 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 ACAD8Q9UKU7 415 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 FAF1Q9UNN5 650 aaPredicted RBP22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 GPR45Q9Y5Y3 372 aa22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 NUP214P35658 2090 aaPredicted RBP22.22■■□□□ 1.15
SDF2L1-201ENST00000248958 USP9XQ93008 2570 aaPredicted RBP22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 GXYLT2A0PJZ3 443 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 FIGNL2A6NMB9 653 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 ZNF195O14628 629 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 FADS1O60427 444 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 AGAP20933 346 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 GAS1P54826 345 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 LRRC74AQ0VAA2 488 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 TP53BP2Q13625 1128 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 DUSP5Q16690 384 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 GSTA3Q16772 222 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 SLC9B1Q4ZJI4 515 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 XKRXQ6PP77 449 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 WDSUB1Q8N9V3 476 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 FAM110BQ8TC76 370 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 ADAMTS15Q8TE58 950 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 JADE3Q92613 823 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 C16orf58Q96GQ5 468 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 DMRTA2Q96SC8 542 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 ZBTB18Q99592 522 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 G6PC3Q9BUM1 346 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 SLC6A15Q9H2J7 730 aa22.21■■□□□ 1.15
SDF2L1-201ENST00000248958 C2orf72A6NCS6 295 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 SCN2BO60939 215 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 WDR1O75083 606 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 HOXD4P09016 255 aaPredicted RBP22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 GCKP35557 465 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 RFX3P48380 749 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 UFM1P61960 85 aa22.2■■□□□ 1.14
SDF2L1-201ENST00000248958 POU6F2P78424 691 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms