RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 NPIPA2E9PIF3 369 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 NPIPA3F8WFD2 350 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 RNASET2O00584 256 aaKnown RBP11.66□□□□□ -0.54
VPREB3-201ENST00000248948 SDHDO14521 159 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 ADAM10O14672 748 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 IL33O95760 270 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 KRT16P08779 473 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 CYP4B1P13584 511 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 LCN1P31025 176 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 PTGER4P35408 488 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 DIO3P55073 304 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 ART3Q13508 389 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 NHSL2Q5HYW2 709 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 EMC4Q5J8M3 183 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 WLSQ5T9L3 541 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 DESI1Q6ICB0 168 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 XKRXQ6PP77 449 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 MRGPRGQ86SM5 289 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 PIWIL2Q8TC59 973 aaKnown RBP11.66□□□□□ -0.54
VPREB3-201ENST00000248948 MAELQ96JY0 434 aaKnown RBP11.66□□□□□ -0.54
VPREB3-201ENST00000248948 C7orf26Q96N11 449 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 STACQ99469 402 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 DPY30Q9C005 99 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 SLC6A15Q9H2J7 730 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 HHATLQ9HCP6 504 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 DUSP22Q9NRW4 184 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 PNPLA3Q9NST1 481 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 AIG1Q9NVV5 245 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 GIN1Q9NXP7 522 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 SPRR3Q9UBC9 169 aa11.66□□□□□ -0.54
VPREB3-201ENST00000248948 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
VPREB3-201ENST00000248948 E9PBE3 544 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GNB5O14775 395 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 ANKRD28O15084 1053 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 ZNHIT1O43257 154 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 CBR3O75828 277 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 SOX30O94993 753 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 C6orf47O95873 294 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 NGFRP08138 427 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 ALOX5P09917 674 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 ACP2P11117 423 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GABRA1P14867 456 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 ACVR2AP27037 513 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GABRA3P34903 492 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GCKP35557 465 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 KIR3DL1P43629 444 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 PRKAG1P54619 331 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GAS1P54826 345 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 CRYZQ08257 329 aaKnown RBP11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GAB1Q13480 694 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPREB3-201ENST00000248948 TMEM211Q6ICI0 200 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 BHLHB9Q6PI77 547 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 SPATA19Q7Z5L4 167 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 WDR53Q7Z5U6 358 aaPredicted RBP11.65□□□□□ -0.54
VPREB3-201ENST00000248948 PLCZ1Q86YW0 608 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 WDSUB1Q8N9V3 476 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GPR151Q8TDV0 419 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 RMND5BQ96G75 393 aaPredicted RBP11.65□□□□□ -0.54
VPREB3-201ENST00000248948 GNRHR2Q96P88 292 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 OR2B2Q9GZK3 357 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 CXorf36Q9H7Y0 433 aa11.65□□□□□ -0.54
VPREB3-201ENST00000248948 MAST4O15021 2626 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 C15orf38-AP3S2A0A0A6YYH1 394 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 TRAPPC6AO75865 159 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 ACTL6AO96019 429 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 HMGN2P05204 90 aaKnown RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 HOXD4P09016 255 aaPredicted RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 ALDOCP09972 364 aaKnown RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 EFNA1P20827 205 aaPredicted RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 EPHA3P29320 983 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 SRD5A2P31213 254 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 CLK3P49761 638 aaKnown RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 HBA1P69905 142 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 GANABQ14697 944 aaKnown RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 LASP1Q14847 261 aaKnown RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 DUSP5Q16690 384 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 SPDYE7PQ495Y7 208 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 GXYLT1Q4G148 440 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 CDC73Q6P1J9 531 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 ACAD11Q709F0 780 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 WDR75Q8IWA0 830 aaKnown RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 PM20D2Q8IYS1 436 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 COX18Q8N8Q8 333 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 SLC16A11Q8NCK7 471 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 FAM83FQ8NEG4 500 aaPredicted RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 PIK3R3Q92569 461 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 SLC9A6Q92581 669 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 JADE3Q92613 823 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 ZNF75CPQ92670 426 aaPredicted RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 G6PC3Q9BUM1 346 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 PRDM14Q9GZV8 571 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 PIGUQ9H490 435 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 SERHLQ9NQF3 203 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 COQ3Q9NZJ6 369 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 PPP4R1LQ9P1A2 415 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 FAF1Q9UNN5 650 aaPredicted RBP11.64□□□□□ -0.55
VPREB3-201ENST00000248948 SNX8Q9Y5X2 465 aa11.64□□□□□ -0.55
VPREB3-201ENST00000248948 HCFC1P51610 2035 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms