RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 LMF2Q9BU23 707 aaKnown RBP19.25■□□□□ 0.67
HCFC1R1-201ENST00000248089 TRIM8Q9BZR9 551 aa19.25■□□□□ 0.67
HCFC1R1-201ENST00000248089 ZNF395Q9H8N7 513 aaPredicted RBP19.25■□□□□ 0.67
HCFC1R1-201ENST00000248089 FLRT3Q9NZU0 649 aa19.25■□□□□ 0.67
HCFC1R1-201ENST00000248089 PPP4R1LQ9P1A2 415 aa19.25■□□□□ 0.67
HCFC1R1-201ENST00000248089 DKKL1Q9UK85 242 aa19.25■□□□□ 0.67
HCFC1R1-201ENST00000248089 FBXL2Q9UKC9 423 aa19.25■□□□□ 0.67
HCFC1R1-201ENST00000248089 TACC2O95359 2948 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 C17orf51A8MQB3 221 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 KDM4EB2RXH2 506 aaPredicted RBP19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 TOXO94900 526 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 IFI6P09912 130 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 DDX5P17844 614 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 GABRA3P34903 492 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 STX5Q13190 355 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 NHSL2Q5HYW2 709 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 C6orf136Q5SQH8 315 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 IL23RQ5VWK5 629 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 LRIG3Q6UXM1 1119 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 IFNEQ86WN2 208 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 NUP43Q8NFH3 380 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 OR7A2PQ8NGA2 310 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 OR4K17Q8NGC6 315 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 GPR151Q8TDV0 419 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 PIK3R3Q92569 461 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 RMND5BQ96G75 393 aaPredicted RBP19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 MS4A4EQ96PG1 132 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 OR2B2Q9GZK3 357 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 PRDM14Q9GZV8 571 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 C3orf14Q9HBI5 128 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 NPDC1Q9NQX5 325 aaPredicted RBP19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 ACSS1Q9NUB1 689 aaPredicted RBP19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 TAS2R10Q9NYW0 307 aa19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 MRTO4Q9UKD2 239 aaKnown RBP19.24■□□□□ 0.67
HCFC1R1-201ENST00000248089 GXYLT2A0PJZ3 443 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 AHRRA9YTQ3 701 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 BIRC5O15392 142 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 ZWINTO95229 277 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 BGNP21810 368 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 RPL3P39023 403 aaKnown RBP19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 FRKP42685 505 aaPredicted RBP19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 ABCE1P61221 599 aaKnown RBP19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 RIPPLY2Q5TAB7 128 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 CROCCP2Q86T23 111 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 ZNF781Q8N8C0 355 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 RNF138Q8WVD3 245 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 SLC9A6Q92581 669 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 DTNBP1Q96EV8 351 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 WDYHV1Q96HA8 205 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 DOCK7Q96N67 2140 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 TRIB1Q96RU8 372 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 PAIP2Q9BPZ3 127 aaKnown RBP19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 SPOCK3Q9BQ16 436 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 ATP6V1HQ9UI12 483 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 MYO9AB2RTY4 2548 aa19.23■□□□□ 0.67
HCFC1R1-201ENST00000248089 CREBBPQ92793 2442 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 KCNH1O95259 989 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 IL33O95760 270 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 ACTL6AO96019 429 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 MSX1P28360 303 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 SRD5A2P31213 254 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 GAS1P54826 345 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 PSMD4P55036 377 aaKnown RBP19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 TFF3Q07654 80 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 VPS26BQ4G0F5 336 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 SEM1Q6ZVN7 128 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 LACC1Q8IV20 430 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 LIX1LQ8IVB5 337 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 KRTCAP2Q8N6L1 136 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 ANKRD42Q8N9B4 389 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 TNIP2Q8NFZ5 429 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 CEP70Q8NHQ1 597 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 OTUB1Q96FW1 271 aaPredicted RBP19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 ENKD1Q9H0I2 346 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 ABCG2Q9UNQ0 655 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 EIF3LQ9Y262 564 aaKnown RBP19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 RPH3AQ9Y2J0 694 aaPredicted RBP19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 PCNX3Q9H6A9 2034 aa19.22■□□□□ 0.67
HCFC1R1-201ENST00000248089 NUP214P35658 2090 aaPredicted RBP19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 TTC36A6NLP5 189 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 EMC8O43402 210 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 EPPINO95925 133 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 DHRS4L1P0CG22 281 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 LAMP1P11279 417 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 DPP4P27487 766 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 SRYQ05066 204 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 MPP2Q14168 576 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 SF3B4Q15427 424 aaKnown RBP eCLIP19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 TNFAIP8L3Q5GJ75 292 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 CPTPQ5TA50 214 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 ENPP6Q6UWR7 440 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 GALNT10Q86SR1 603 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 ZNF295-AS1Q8N0V1 137 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 CDRT4Q8N9R6 151 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 JADE3Q92613 823 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 CHMP6Q96FZ7 201 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 PGM2Q96G03 612 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 SFXN2Q96NB2 322 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 YIPF4Q9BSR8 244 aa19.21■□□□□ 0.67
HCFC1R1-201ENST00000248089 FAM120CQ9NX05 1096 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms