RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 LOC102723532A0A0G2JNH3 316 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 CPSF4LA6NMK7 179 aaKnown RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 OR5K4A6NMS3 321 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 C2orf74A8MZ97 194 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 KDM4EB2RXH2 506 aaPredicted RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 H0YGG7 62 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 TNFP01375 233 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 THY1P04216 161 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ATP1B1P05026 303 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ACP2P11117 423 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ARF3P61204 181 aaPredicted RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 RPS3AP61247 264 aaKnown RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SIM1P81133 766 aaPredicted RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 CDC20Q12834 499 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 LARS2Q15031 903 aaKnown RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 DUSP5Q16690 384 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ZCCHC12Q6PEW1 402 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SLC36A4Q6YBV0 504 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 MBOAT2Q6ZWT7 520 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 RRM2BQ7LG56 351 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 LYSMD2Q8IV50 215 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 TRIM48Q8IWZ4 208 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 PEX5LQ8IYB4 626 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 OR4N4Q8N0Y3 316 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 OR8D4Q8NGM9 314 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 RPLP0P6Q8NHW5 317 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 FAM3CQ92520 227 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 CDS1Q92903 461 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SLC41A3Q96GZ6 507 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SLC38A2Q96QD8 506 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 MCHR1Q99705 422 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF350Q9GZX5 532 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 EGLN3Q9H6Z9 239 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SP140LQ9H930 580 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ISYNA1Q9NPH2 558 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 QPCTLQ9NXS2 382 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 CPNE7Q9UBL6 633 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 STUB1Q9UNE7 303 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SATB2Q9UPW6 733 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 TICRRQ7Z2Z1 1910 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 NINQ8N4C6 2090 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 KIR2DS5A0A0G2JLQ3 304 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 A0A0G2JNG1 304 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 PNMA8CA0A1B0GUJ8 204 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 TMEM129A0AVI4 362 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 KIR2DS3K7RE56 304 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 MYL12BO14950 172 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 PLOD3O60568 738 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 MED26O95402 600 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 GABRG2P18507 467 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 AVPR1BP47901 424 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 LSSP48449 732 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 EEF1A1P68104 462 aaKnown RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 BNC1Q01954 994 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 KIR2DS5Q14953 304 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 MINDY4Q4G0A6 757 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 GDF7Q7Z4P5 450 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 CCDC190Q86UF4 302 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 NKAIN4Q8IVV8 208 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 OR4N5Q8IXE1 308 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 PHC2Q8IXK0 858 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 PARP16Q8N5Y8 322 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF655Q8N720 491 aaPredicted RBP15.1■□□□□ 0.01
UBE3D-201ENST00000237186 CLDN22Q8N7P3 220 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 OR10G6Q8NH81 332 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SLC9A6Q92581 669 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 PMM1Q92871 262 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 OSTF1Q92882 214 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 ITPKCQ96DU7 683 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 DUSP22Q9NRW4 184 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 MED17Q9NVC6 651 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 EVA1BQ9NVM1 165 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 MMP17Q9ULZ9 603 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 DOLKQ9UPQ8 538 aa15.1■□□□□ 0.01
UBE3D-201ENST00000237186 SPTBN5Q9NRC6 3674 aaKnown RBP15.09■□□□□ 0.01
UBE3D-201ENST00000237186 ATG2BQ96BY7 2078 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 SNRNP200O75643 2136 aaKnown RBP15.09■□□□□ 0.01
UBE3D-201ENST00000237186 A0A0J9YY10 115 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 HYKKA2RU49 373 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 PRAMEF26H0Y7S4 382 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 CYR61O00622 381 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 SEMA4FO95754 770 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 RPS4Y1P22090 263 aaKnown RBP15.09■□□□□ 0.01
UBE3D-201ENST00000237186 SOX3P41225 446 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 TFF2Q03403 129 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 TMEM44Q2T9K0 475 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 EIPR1Q53HC9 387 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 AGAP7PQ5VUJ5 663 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 PLEKHM3Q6ZWE6 761 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 OR9Q1Q8NGQ5 310 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 RERGQ96A58 199 aaPredicted RBP15.09■□□□□ 0.01
UBE3D-201ENST00000237186 FAM46AQ96IP4 442 aaKnown RBP15.09■□□□□ 0.01
UBE3D-201ENST00000237186 ASPNQ9BXN1 380 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 NUAK2Q9H093 628 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 TMEM74BQ9NUR3 256 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 USP36Q9P275 1121 aaKnown RBP15.09■□□□□ 0.01
UBE3D-201ENST00000237186 SPACA6W5XKT8 324 aa15.09■□□□□ 0.01
UBE3D-201ENST00000237186 MDC1Q14676 2089 aaKnown RBP15.09■□□□□ 0.01
UBE3D-201ENST00000237186 TCRBV21S2A2A0A5A6 115 aa15.08■□□□□ 0.01
UBE3D-201ENST00000237186 ZNF670-ZNF695F2Z2N8 137 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms