RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 OSMP13725 252 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ABOP16442 354 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 SCN1AP35498 2009 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 RAB2AP61019 212 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 WDR5P61964 334 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 BLOC1S1P78537 153 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ELAVL2Q12926 359 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 SF1Q15637 639 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 SLC5A12Q1EHB4 618 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 TPRA1Q86W33 373 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ZNF561Q8N587 486 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 ZNF485Q8NCK3 441 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 HUS1BQ8NHY5 278 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 KCTD12Q96CX2 325 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 ZC3H10Q96K80 434 aaKnown RBP12.26□□□□□ -0.45
MSH2-201ENST00000233146 NTMT1Q9BV86 223 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 FXYD6Q9H0Q3 95 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 FZD8Q9H461 694 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 OPN4Q9UHM6 478 aa12.26□□□□□ -0.45
MSH2-201ENST00000233146 SOCS7O14512 581 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 F12P00748 615 aaPredicted RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 SRPRAP08240 638 aaKnown RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 IGFBP1P08833 259 aaPredicted RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 VAMP1P23763 118 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 RAD52P43351 418 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 MTNR1BP49286 362 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 TLE2Q04725 743 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 OR51Q1Q8NH59 317 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 TRMT10AQ8TBZ6 339 aaKnown RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 THAP4Q8WY91 577 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 RGMAQ96B86 450 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 HS6ST2Q96MM7 605 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 PANX1Q96RD7 426 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 C19orf43Q9BQ61 176 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 CTPS2Q9NRF8 586 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 TNFSF13BQ9Y275 285 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 BTAF1O14981 1849 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 OR6C74A6NCV1 312 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 MAGEB17A8MXT2 336 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 BEST1O76090 585 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 LATS1O95835 1130 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 PSMB1P20618 241 aaKnown RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 IDSP22304 550 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 NFYBP25208 207 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 SOX18P35713 384 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 AKR1C2P52895 323 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 AKR1C1Q04828 323 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 LDLRAD1Q5T700 205 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 ZNF621Q6ZSS3 439 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 NUDT13Q86X67 352 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 OR6V1Q8N148 313 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 NAGSQ8N159 534 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 FAM26EQ8N5C1 309 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 MEIOBQ8N635 442 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 FAM98AQ8NCA5 519 aaKnown RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 OR6B3Q8NGW1 331 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 CD99L2Q8TCZ2 262 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 EMID1Q96A84 441 aaPredicted RBP12.25□□□□□ -0.45
MSH2-201ENST00000233146 FAIM2Q9BWQ8 316 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 OR10A4Q9H209 315 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 TBC1D17Q9HA65 648 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 KCNK12Q9HB15 430 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 PISDQ9UG56 409 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 CA14Q9ULX7 337 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 OR10H1Q9Y4A9 318 aa12.25□□□□□ -0.45
MSH2-201ENST00000233146 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 OIP5O43482 229 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ULK1O75385 1050 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 RPA2P15927 270 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ANXA7P20073 488 aaKnown RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 XCR1P46094 333 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 NDUFV1P49821 464 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 BCL2L1Q07817 233 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 GANABQ14697 944 aaKnown RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 XKR6Q5GH73 641 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 CRB2Q5IJ48 1285 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 DPPA2Q7Z7J5 298 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 BOLLQ8N9W6 283 aaKnown RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 ZBED3Q96IU2 234 aaPredicted RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 CMTM3Q96MX0 182 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 SLC25A51Q9H1U9 297 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 CACYBPQ9HB71 228 aaKnown RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 FGF20Q9NP95 211 aaPredicted RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ZNF69Q9UC07 566 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 AFF4Q9UHB7 1163 aaKnown RBP12.24□□□□□ -0.45
MSH2-201ENST00000233146 DHRS7Q9Y394 339 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ZNF879B4DU55 563 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 C22orf31O95567 290 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 MGMTP16455 207 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 UQCRC2P22695 453 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 PCGF2P35227 344 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 SREBF2Q12772 1141 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 SSPNQ14714 243 aa12.24□□□□□ -0.45
MSH2-201ENST00000233146 ATP13A5Q4VNC0 1218 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms