RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 RTL6Q6ICC9 239 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 GK5Q6ZS86 529 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 GALNT10Q86SR1 603 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 ANKRD46Q86W74 232 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 TRIM42Q8IWZ5 723 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 FAM109AQ8N4B1 249 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 FAM98AQ8NCA5 519 aaKnown RBP12.53□□□□□ -0.4
VEGFA-201ENST00000230480 FBXO30Q8TB52 745 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 TMEM41AQ96HV5 264 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 YIPF4Q9BSR8 244 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 ACKR4Q9NPB9 350 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 EQTNQ9NQ60 294 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 CBLCQ9ULV8 474 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
VEGFA-201ENST00000230480 INTS1Q8N201 2190 aaKnown RBP12.52□□□□□ -0.4
VEGFA-201ENST00000230480 ITPR2Q14571 2701 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 KDM4EB2RXH2 506 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-201ENST00000230480 RNASET2O00584 256 aaKnown RBP12.52□□□□□ -0.41
VEGFA-201ENST00000230480 TP53I11O14683 189 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 GNB5O14775 395 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 COQ9O75208 318 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 KCNK2O95069 426 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 CDKN2CP42773 168 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.41
VEGFA-201ENST00000230480 PRKAG1P54619 331 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 NRG3P56975 720 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 KCNJ2P63252 427 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 MRPS22P82650 360 aaKnown RBP12.52□□□□□ -0.41
VEGFA-201ENST00000230480 PGS1Q32NB8 556 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 EIPR1Q53HC9 387 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 CGB2Q6NT52 195 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 C3P1Q6ZMU1 363 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 OLIG3Q7RTU3 272 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 SPATA19Q7Z5L4 167 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 FJX1Q86VR8 437 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 FUNDC1Q8IVP5 155 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 GHDCQ8N2G8 530 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 OR9I1Q8NGQ6 314 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 OR4C3Q8NH37 302 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 GOT1L1Q8NHS2 421 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-201ENST00000230480 FAM57AQ8TBR7 257 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 INPP5KQ9BT40 448 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 DOHHQ9BU89 302 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 SLC6A15Q9H2J7 730 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 SDR39U1Q9NRG7 319 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-201ENST00000230480 INTS9Q9NV88 658 aaKnown RBP12.52□□□□□ -0.41
VEGFA-201ENST00000230480 FBXL2Q9UKC9 423 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 C15orf41Q9Y2V0 281 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 MED12LQ86YW9 2145 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 DOCK7Q96N67 2140 aa12.52□□□□□ -0.41
VEGFA-201ENST00000230480 PRAMEF25A6NGN4 478 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 TRPC5OSA6NMA1 111 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 CAPN14A8MX76 684 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 NPIPB9F8W1W9 429 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 SLCO1B7G3V0H7 640 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 ZIC3O60481 467 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 ZG16O60844 167 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 SNX4O95219 450 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 HPNP05981 417 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 HOXB9P17482 250 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 GPC1P35052 558 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 RPL3P39023 403 aaKnown RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 MRPL19P49406 292 aaKnown RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 MNAT1P51948 309 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 MVDP53602 400 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 RPS26P62854 115 aaKnown RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 GNGT1P63211 74 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 PLGLB1Q02325 96 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 SNTA1Q13424 505 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 LASP1Q14847 261 aaKnown RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 GRAMD1BQ3KR37 738 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 FAM174BQ3ZCQ3 159 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 PDCD4Q53EL6 469 aaKnown RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 TBCELQ5QJ74 424 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 DCST1Q5T197 706 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 CCNJQ5T5M9 372 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 OR5M10Q6IEU7 315 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 SLC30A6Q6NXT4 461 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 SLC22A16Q86VW1 577 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 KIRREL3Q8IZU9 778 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 FADS6Q8N9I5 356 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 CDRT4Q8N9R6 151 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 OR5AK3PQ8NH89 298 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 ZFP28Q8NHY6 868 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 BCAS4Q8TDM0 211 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 SSC4DQ8WTU2 575 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 ITLN2Q8WWU7 325 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 CCDC120Q96HB5 630 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 MAGEB18Q96M61 343 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 NPAS1Q99742 590 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 DPY30Q9C005 99 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 PNPLA3Q9NST1 481 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 ZCCHC3Q9NUD5 404 aaKnown RBP12.51□□□□□ -0.41
VEGFA-201ENST00000230480 KCNE5Q9UJ90 142 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 CACNA1DQ01668 2161 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 NAV2Q8IVL1 2488 aa12.51□□□□□ -0.41
VEGFA-201ENST00000230480 MAST4O15021 2626 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms