RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MC3RP41968 323 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 CHRNEQ04844 493 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 KCNAB2Q13303 367 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 OR56B2PQ8NGI1 322 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 POTEKPQ9BYX7 375 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 SLAMF7Q9NQ25 335 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 SLC9B1P1A6NJY1 282 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 SOCS7O14512 581 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 WDPCPO95876 746 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 TIMP2P16035 220 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 ADH6P28332 368 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 ERP29P30040 261 aaKnown RBP12.53□□□□□ -0.4
COL1A1-201ENST00000225964 CD6P30203 668 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 PBX2P40425 430 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 METTL2BQ6P1Q9 378 aaKnown RBP12.53□□□□□ -0.4
COL1A1-201ENST00000225964 APIPQ96GX9 242 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 PLEKHJ1Q9NW61 149 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 ZDHHC7Q9NXF8 308 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 TMEM59LQ9UK28 342 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 LSM5Q9Y4Y9 91 aaKnown RBP12.53□□□□□ -0.4
COL1A1-201ENST00000225964 MON2Q7Z3U7 1717 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 OR52A4PA6NMU1 304 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 KNG1P01042 644 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 GABRR1P24046 479 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 CDKN2CP42773 168 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 RPP30P78346 268 aaKnown RBP12.53□□□□□ -0.4
COL1A1-201ENST00000225964 IRF4Q15306 451 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF551Q7Z340 670 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-201ENST00000225964 FAM210AQ96ND0 272 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 SYT3Q9BQG1 590 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 RLIMQ9NVW2 624 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 A0A087WUU8 490 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 SDHDO14521 159 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 AMY2AP04746 511 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 CLCN2P51788 898 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 FGL1Q08830 312 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 COMMD6Q7Z4G1 85 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 RSC1A1Q92681 617 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 SDSLQ96GA7 329 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 TXNDC15Q96J42 360 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 ULBP3Q9BZM4 244 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 ST14Q9Y5Y6 855 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 A6NIZ1 184 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 RAP1BP61224 184 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 RAP1AP62834 184 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 SCAPQ12770 1279 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 PKDCCQ504Y2 493 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 LRP10Q7Z4F1 713 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 OR52B6Q8NGF0 335 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 CCDC106Q9BWC9 280 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 TBCCD1Q9NVR7 557 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 HIF1ANQ9NWT6 349 aa12.53□□□□□ -0.4
COL1A1-201ENST00000225964 VSX1Q9NZR4 365 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-201ENST00000225964 EDN3P14138 238 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 CRABP1P29762 137 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 LUMP51884 338 aaPredicted RBP12.52□□□□□ -0.4
COL1A1-201ENST00000225964 TEX26Q8N6G2 289 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 CASD1Q96PB1 797 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 OR10A5Q9H207 317 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 OR10A2Q9H208 303 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 ERVK-19Q9WJR5 959 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 KIAA0513O60268 411 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 SERPINA5P05154 406 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.4
COL1A1-201ENST00000225964 KDELR2P33947 212 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 CSNK1A1P48729 337 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 SGSHP51688 502 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 PRPS1P60891 318 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 SQSTM1Q13501 440 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.52□□□□□ -0.4
COL1A1-201ENST00000225964 C9orf135Q5VTT2 229 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 OR51L1Q8NGJ5 315 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 INPP5KQ9BT40 448 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 HCAR1Q9BXC0 346 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 SYNPO2LQ9H987 977 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 RICTORQ6R327 1708 aa12.52□□□□□ -0.4
COL1A1-201ENST00000225964 A0A0U1RQK1 487 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-201ENST00000225964 TOXO94900 526 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 CYBAP13498 195 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 ACBD7Q8N6N7 88 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 OR52R1Q8NGF1 315 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 OR1S1Q8NH92 325 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 HLA-CQ95604 372 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 SENP5Q96HI0 755 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-201ENST00000225964 UBXN10Q96LJ8 280 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 TEPSINQ96N21 525 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 TP63Q9H3D4 680 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-201ENST00000225964 ARMC1Q9NVT9 282 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.41
COL1A1-201ENST00000225964 BMP1P13497 986 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 RAB3BP20337 219 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 HOXD13P35453 343 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 TNFRSF4P43489 277 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 MAMDC4Q6UXC1 1216 aa12.52□□□□□ -0.41
COL1A1-201ENST00000225964 SLC2A12Q8TD20 617 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms