RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 VAPAQ9P0L0 249 aa21.72■■□□□ 1.07
HOMER3-201ENST00000221222 CHCHD2Q9Y6H1 151 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-201ENST00000221222 CLIC1O00299 241 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 NME2P1O60361 137 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 UGT2B11O75310 529 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 KCNK2O95069 426 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 IL33O95760 270 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 AGR2O95994 175 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 COX4I1P13073 169 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 NME2P22392 152 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 IL12BP29460 328 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 POU6F2P78424 691 aaPredicted RBP21.71■■□□□ 1.07
HOMER3-201ENST00000221222 TLE1Q04724 770 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 EFR3AQ14156 821 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 MMEL1Q495T6 779 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 COLEC12Q5KU26 742 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 SLC22A10Q63ZE4 541 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 FAM91A1Q658Y4 838 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 REP15Q6BDI9 236 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 RPUSD3Q6P087 351 aaKnown RBP21.71■■□□□ 1.07
HOMER3-201ENST00000221222 SPPL2AQ8TCT8 520 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 ADOQ96SZ5 270 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 HES7Q9BYE0 225 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 KCNE3Q9Y6H6 103 aa21.71■■□□□ 1.07
HOMER3-201ENST00000221222 NBASA2RRP1 2371 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 UNC5CO95185 931 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 NPPAP01160 153 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 PPIBP23284 216 aaKnown RBP21.7■■□□□ 1.06
HOMER3-201ENST00000221222 PRDX6P30041 224 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 ANXA11P50995 505 aaKnown RBP21.7■■□□□ 1.06
HOMER3-201ENST00000221222 CASP9P55211 416 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 RPP38P78345 283 aaKnown RBP21.7■■□□□ 1.06
HOMER3-201ENST00000221222 NFYCQ13952 458 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 COX20Q5RI15 118 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 TNFAIP8L2Q6P589 184 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-201ENST00000221222 TMEM81Q6P7N7 255 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 POU5F2Q8N7G0 328 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 Q8NA96 180 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 OR52N2Q8NGI0 321 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 OR5M3Q8NGP4 307 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 PNPT1Q8TCS8 783 aaKnown RBP21.7■■□□□ 1.06
HOMER3-201ENST00000221222 EFHD2Q96C19 240 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-201ENST00000221222 CNIH4Q9P003 139 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 ANAPC2Q9UJX6 822 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 KLF13Q9Y2Y9 288 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-201ENST00000221222 PCDHGA10Q9Y5H3 936 aa21.7■■□□□ 1.06
HOMER3-201ENST00000221222 HMGN4O00479 90 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 MRASO14807 208 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 SORBS2O94875 1100 aaKnown RBP21.69■■□□□ 1.06
HOMER3-201ENST00000221222 AK1P00568 194 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 IGKV1D-16P01601 117 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 OR12D1P0DN82 309 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 CCL3P10147 92 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 INAQ16352 499 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.69■■□□□ 1.06
HOMER3-201ENST00000221222 TRMT5Q32P41 509 aaKnown RBP21.69■■□□□ 1.06
HOMER3-201ENST00000221222 HEPHL1Q6MZM0 1159 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 FBXW8Q8N3Y1 598 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 CHDHQ8NE62 594 aaPredicted RBP21.69■■□□□ 1.06
HOMER3-201ENST00000221222 CMTM5Q96DZ9 223 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 CGREF1Q99674 301 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 G6PC3Q9BUM1 346 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 RAD21L1Q9H4I0 556 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 KLHL1Q9NR64 748 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 SACM1LQ9NTJ5 587 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 EXD2Q9NVH0 621 aa21.69■■□□□ 1.06
HOMER3-201ENST00000221222 CNOT11Q9UKZ1 510 aaKnown RBP21.69■■□□□ 1.06
HOMER3-201ENST00000221222 ANKRD33BA6NCL7 494 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 P04436 131 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 LCN1P31025 176 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 FADDQ13158 208 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 RUNDC3AQ59EK9 446 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 DCST2Q5T1A1 773 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.68■■□□□ 1.061e-8■■■■□ 19.6
HOMER3-201ENST00000221222 DESI1Q6ICB0 168 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 FIGNL1Q6PIW4 674 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 GALNTL5Q7Z4T8 443 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 PCYOX1LQ8NBM8 494 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 RNF138Q8WVD3 245 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 RAB8BQ92930 207 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 TMCO6Q96DC7 493 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 ANKRD27Q96NW4 1050 aa21.68■■□□□ 1.06
HOMER3-201ENST00000221222 CYP4B1P13584 511 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 CNR1P21554 472 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 RGNQ15493 299 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 ARHGAP11BQ3KRB8 267 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 TBCELQ5QJ74 424 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 CCNJQ5T5M9 372 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 ATAD3BQ5T9A4 648 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 XAGE5Q8WWM1 108 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 NTNG2Q96CW9 530 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 RCN3Q96D15 328 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 NODALQ96S42 347 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 CPPED1Q9BRF8 314 aaPredicted RBP21.67■■□□□ 1.06
HOMER3-201ENST00000221222 IL1RL2Q9HB29 575 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.67■■□□□ 1.06
HOMER3-201ENST00000221222 CORO2BQ9UQ03 480 aa21.67■■□□□ 1.06
HOMER3-201ENST00000221222 UBR5O95071 2799 aaPredicted RBP21.67■■□□□ 1.06
HOMER3-201ENST00000221222 KLRC4-KLRK1H3BQV0 150 aa21.66■■□□□ 1.06
HOMER3-201ENST00000221222 FXYD1O00168 92 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms