RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CCR2P41597 374 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 RGS4P49798 205 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 CCDC157Q569K6 752 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 FAM109BQ6ICB4 259 aaPredicted RBP12.83□□□□□ -0.35
GABPB1-201ENST00000220429 IL27RAQ6UWB1 636 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 NXPE1Q8N323 547 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 CBARPQ8N350 705 aaPredicted RBP12.83□□□□□ -0.35
GABPB1-201ENST00000220429 OXR1Q8N573 874 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 ZBTB2Q8N680 514 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 DENND6BQ8NEG7 585 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 CNOT9Q92600 299 aaKnown RBP12.83□□□□□ -0.35
GABPB1-201ENST00000220429 CPNE4Q96A23 557 aaPredicted RBP12.83□□□□□ -0.35
GABPB1-201ENST00000220429 LYSMD1Q96S90 227 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 TCF25Q9BQ70 676 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 YIPF4Q9BSR8 244 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 METTL17Q9H7H0 456 aaPredicted RBP12.83□□□□□ -0.35
GABPB1-201ENST00000220429 IPPKQ9H8X2 491 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 C11orf16Q9NQ32 467 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 OARD1Q9Y530 152 aa12.83□□□□□ -0.35
GABPB1-201ENST00000220429 C5orf52A6NGY3 159 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 ADAMDEC1O15204 470 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 ALDOBP05062 364 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 DGKAP23743 735 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 EVX1P49640 407 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 B3GNTL1Q67FW5 361 aaPredicted RBP12.83□□□□□ -0.36
GABPB1-201ENST00000220429 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
GABPB1-201ENST00000220429 PGAP1Q75T13 922 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 BPIFCQ8NFQ6 507 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 HS6ST2Q96MM7 605 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 DDOQ99489 341 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 NEU1Q99519 415 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 TXNL4BQ9NX01 149 aaKnown RBP12.83□□□□□ -0.36
GABPB1-201ENST00000220429 MARK1Q9P0L2 795 aa12.83□□□□□ -0.36
GABPB1-201ENST00000220429 RHPN2P1A8MT19 583 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 AGAP14A8MT82 685 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 EGFP01133 1207 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 LINC00271P0C7V0 271 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 VAMP1P23763 118 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 SNRPD1P62314 119 aaKnown RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 LYPLAL1Q5VWZ2 237 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ZNF730Q6ZMV8 503 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 RFLNAQ6ZTI6 216 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 TPRG1Q6ZUI0 275 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 KREMEN2Q8NCW0 462 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 TMEM163Q8TC26 289 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 CA5BP1Q8WTZ4 195 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ECHDC3Q96DC8 303 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 RBM18Q96H35 190 aaKnown RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 RNF32Q9H0A6 362 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ABCG5Q9H222 651 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 NDUFB11Q9NX14 153 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 EXTL2Q9UBQ6 330 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 NPTNQ9Y639 398 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 DISC1C4P0D8 188 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 CCL16O15467 120 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 SSNA1O43805 119 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 BRINP1O60477 761 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 LILRB5O75023 590 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ZNF682O95780 498 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 PAK4O96013 591 aaPredicted RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 HPP00738 406 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 GDF5P43026 501 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 SMCO1Q147U7 214 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ABRAXAS2Q15018 415 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 NCF4Q15080 339 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 PLAG1Q6DJT9 500 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 C22orf39Q6P5X5 142 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ASB18Q6ZVZ8 466 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 NUDT8Q8WV74 236 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 C14orf144Q96I85 54 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 FCRL1Q96LA6 429 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 TSNAXQ99598 290 aaKnown RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 SUV39H2Q9H5I1 410 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 SYNDIG1Q9H7V2 258 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 HEBP1Q9NRV9 189 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 HCFC1R1Q9NWW0 138 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ZMYM5Q9UJ78 669 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 HS3ST2Q9Y278 367 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 CARNS1A5YM72 827 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 GPR31O00270 319 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 TXNL1O43396 289 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 STX11O75558 287 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 RECKO95980 971 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 OTCP00480 354 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 TIMP1P01033 207 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 RAB5BP61020 215 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 PTSQ03393 145 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 ILKQ13418 452 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 SPIN4Q56A73 249 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 DHRS7BQ6IAN0 325 aaPredicted RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 C22orf42Q6IC83 251 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 TMEM91Q6ZNR0 172 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 MILR1Q7Z6M3 343 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 TMEM17Q86X19 198 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 PUSL1Q8N0Z8 303 aaKnown RBP12.82□□□□□ -0.36
GABPB1-201ENST00000220429 OR9Q1Q8NGQ5 310 aa12.82□□□□□ -0.36
GABPB1-201ENST00000220429 EGFL8Q99944 293 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms