RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 SP140Q13342 867 aa13.82□□□□□ -0.2
PTPRA-201ENST00000216877 USF2Q15853 346 aaPredicted RBP13.82□□□□□ -0.2
PTPRA-201ENST00000216877 H3F3CQ6NXT2 135 aa13.82□□□□□ -0.2
PTPRA-201ENST00000216877 C3orf49Q96BT1 292 aa13.82□□□□□ -0.2
PTPRA-201ENST00000216877 BOCQ9BWV1 1114 aa13.82□□□□□ -0.2
PTPRA-201ENST00000216877 CHST2Q9Y4C5 530 aa13.82□□□□□ -0.2
PTPRA-201ENST00000216877 PPP2R3BQ9Y5P8 575 aa13.82□□□□□ -0.2
PTPRA-201ENST00000216877 LRRN3E7EW58 273 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 YY2O15391 372 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 LCMT2O60294 686 aaKnown RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 CREBL2O60519 120 aaPredicted RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ANXA5P08758 320 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ZNF14P17017 642 aaPredicted RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 RFC3P40938 356 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 PPT1P50897 306 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 CRYBA2P53672 197 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SEMG2Q02383 582 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SYT14P1Q58G82 188 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 MANEALQ5VSG8 457 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ACSM5Q6NUN0 579 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SBSNQ6UWP8 590 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 BTN2A1Q7KYR7 527 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 LDLRAD3Q86YD5 345 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 MTMR14Q8NCE2 650 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 PINK1Q9BXM7 581 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 LRRN3Q9H3W5 708 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SLC25A19Q9HC21 320 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 DERAQ9Y315 318 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 EVPLQ92817 2033 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SLC9B1P1A6NJY1 282 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SAP18O00422 153 aaKnown RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SELENOFO60613 162 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 BTCP35070 178 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 RPIAP49247 311 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SSTP61278 116 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 WDR5P61964 334 aaKnown RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ZNF33AQ06730 810 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 PIN1Q13526 163 aaPredicted RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ATXN7L2Q5T6C5 722 aaPredicted RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 RBM45Q8IUH3 476 aaKnown RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ARRDC2Q8TBH0 407 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 KCTD13Q8WZ19 329 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 OR1F2PQ96R84 312 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 C1QTNF3Q9BXJ4 246 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ZDHHC4Q9NPG8 344 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 SLC22A14Q9Y267 594 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 GLTPD2A6NH11 291 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ADAM12O43184 909 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 IRAK2O43187 625 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 C6orf47O95873 294 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 IFNA4P05014 189 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 KLK3P07288 261 aaPredicted RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ZNF35P13682 527 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 GABRA1P14867 456 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 ACVR1BP36896 505 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 CDH11P55287 796 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 POU4F2Q12837 409 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 CHIT1Q13231 466 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 PLBD1Q6P4A8 553 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 CHST14Q8NCH0 376 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 WBP1Q96G27 269 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 FAIM2Q9BWQ8 316 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 MROH8Q9H579 483 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 UFSP2Q9NUQ7 469 aa13.81□□□□□ -0.2
PTPRA-201ENST00000216877 DHCR7Q9UBM7 475 aaKnown RBP13.81□□□□□ -0.2
PTPRA-201ENST00000216877 PRICKLE3O43900 615 aaPredicted RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 TAP2Q03519 686 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 STX4Q12846 297 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 RAB8BQ92930 207 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 NMUR1Q9HB89 426 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 GPN1Q9HCN4 374 aaPredicted RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 E7EQ34 232 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 GOSR2O14653 212 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 KLK8O60259 260 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 CDC123O75794 336 aaPredicted RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 C22orf31O95567 290 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 GDNFP39905 211 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 CXCL17Q6UXB2 119 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 APOOLQ6UXV4 268 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 USP50Q70EL3 339 aaPredicted RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 CEACAM19Q7Z692 300 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 TECPR1Q7Z6L1 1165 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 MCATQ8IVS2 390 aaKnown RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 NPAS3Q8IXF0 933 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 OR5M1Q8NGP8 315 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 RXFP4Q8TDU9 374 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 RHOVQ96L33 236 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 YIPF4Q9BSR8 244 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 XKR8Q9H6D3 395 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 RBPJLQ9UBG7 517 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 ARID1BQ8NFD5 2236 aaPredicted RBP13.8□□□□□ -0.2
PTPRA-201ENST00000216877 IGKV6-21A0A0C4DH24 114 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 TRDV1A0A1B0GX56 115 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 PRAMEF25A6NGN4 478 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 SLC28A2O43868 658 aa13.8□□□□□ -0.2
PTPRA-201ENST00000216877 H1F0P07305 194 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms