RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SOX2P48431 317 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 DNAJB13P59910 316 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 TEX10Q9NXF1 929 aaPredicted RBP12.95□□□□□ -0.34
SIX4-201ENST00000216513 WASF3Q9UPY6 502 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 XPNPEP2O43895 674 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 KLHL22Q53GT1 634 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
SIX4-201ENST00000216513 KDM1BQ8NB78 822 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 GNPDA2Q8TDQ7 276 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 S100ZQ8WXG8 99 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 ERVK-18Q9QC07 812 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 FABP12A6NFH5 140 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 MAOAP21397 527 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 RUNDC3AQ59EK9 446 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 SLC22A10Q63ZE4 541 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 FTMTQ8N4E7 242 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 CDRT4Q8N9R6 151 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 ZNF707Q96C28 371 aaPredicted RBP12.95□□□□□ -0.34
SIX4-201ENST00000216513 IER2Q9BTL4 223 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 CBLCQ9ULV8 474 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 LOC285095A0A1B0GVY8 99 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 PPM1BO75688 479 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 OR3A3P47888 321 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 OR3A2P47893 321 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 PYCR3Q53H96 274 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 CES4AQ5XG92 561 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 GALNT11Q8NCW6 608 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 RAB26Q9ULW5 256 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 C17orf113A0A1B0GUU1 675 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 UNC119BA6NIH7 251 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 RAB38P57729 211 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 E2F2Q14209 437 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 EXT1Q16394 746 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 PLET1Q6UQ28 207 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 TMEM92Q6UXU6 159 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 SVOPLQ8N434 492 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 ARFGAP1Q8N6T3 406 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 GPR160Q9UJ42 338 aa12.95□□□□□ -0.34
SIX4-201ENST00000216513 ANXA8P13928 327 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 LRFN4Q6PJG9 635 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 EPGNQ6UW88 154 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 ZNF595Q8IYB9 648 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 ENDOVQ8N8Q3 282 aaKnown RBP12.94□□□□□ -0.34
SIX4-201ENST00000216513 OR8H1Q8NGG4 311 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 CREG1O75629 220 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 KCNK5O95279 499 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 HTR1AP08908 422 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 FGF3P11487 239 aaPredicted RBP12.94□□□□□ -0.34
SIX4-201ENST00000216513 MTHFD2P13995 350 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 ABCA11PQ4W5N1 156 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 KLHL36Q8N4N3 616 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 TNFAIP8L1Q8WVP5 186 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 CDS1Q92903 461 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 FOXN4Q96NZ1 517 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 MAPKAP1Q9BPZ7 522 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 ZNF99A8MXY4 864 aaPredicted RBP12.94□□□□□ -0.34
SIX4-201ENST00000216513 RETP07949 1114 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 FECHP22830 423 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 PRDX6P30041 224 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 LILRA3Q8N6C8 439 aaPredicted RBP12.94□□□□□ -0.34
SIX4-201ENST00000216513 ECHDC3Q96DC8 303 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 AASSQ9UDR5 926 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 GRIP1Q9Y3R0 1128 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 KDM4BO94953 1096 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 GSTM2P28161 218 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 NAA10P41227 235 aaPredicted RBP12.94□□□□□ -0.34
SIX4-201ENST00000216513 NKPD1Q17RQ9 610 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 SWI5Q1ZZU3 235 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 MARCH9Q86YJ5 346 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 SYT14Q8NB59 555 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 DNAJB9Q9UBS3 223 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 ST14Q9Y5Y6 855 aa12.94□□□□□ -0.34
SIX4-201ENST00000216513 EDIL3O43854 480 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 FMO6PO60774 539 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 H6PDO95479 791 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 ERVPABLB-1P60509 514 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 MAP4K2Q12851 820 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 NKAPLQ5M9Q1 402 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 OR52N2Q8NGI0 321 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 OR5K1Q8NHB7 308 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 STON2Q8WXE9 905 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
SIX4-201ENST00000216513 PATE3B3GLJ2 98 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 CSF2P04141 144 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 FAUP35544 74 aaKnown RBP12.93□□□□□ -0.34
SIX4-201ENST00000216513 TMEM44Q2T9K0 475 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 TMEM176BQ3YBM2 270 aaPredicted RBP12.93□□□□□ -0.34
SIX4-201ENST00000216513 CTSL3PQ5NE16 218 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 ZER1Q7Z7L7 766 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 CADM4Q8NFZ8 388 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 MTMR10Q9NXD2 777 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 ADAM18Q9Y3Q7 739 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 EVPLQ92817 2033 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 TNFSF14O43557 240 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 LCATP04180 440 aa12.93□□□□□ -0.34
SIX4-201ENST00000216513 HIST1H1TP22492 207 aaPredicted RBP12.93□□□□□ -0.34
SIX4-201ENST00000216513 RBM48Q5RL73 367 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms