RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SCD5Q86SK9 330 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 CD163Q86VB7 1156 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 CCDC71Q8IV32 467 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 OR5B2Q96R09 309 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 IER3IP1Q9Y5U9 82 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 GSTM2P28161 218 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 HLCSP50747 726 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 ART1P52961 327 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 LSAMPQ13449 338 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 BCDIN3DQ7Z5W3 292 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 ABHD11Q8NFV4 315 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 COPZ2Q9P299 210 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 EMCNQ9ULC0 261 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC7A11Q9UPY5 501 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 MED16Q9Y2X0 877 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 IFNA2P01563 188 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 CEBPBP17676 345 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF84P51523 738 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 DYRK1AQ13627 763 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 LCN10Q6JVE6 187 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 C15orf39Q6ZRI6 1047 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 RFLNAQ6ZTI6 216 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 ASB15Q8WXK1 588 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 TCEAL4Q96EI5 215 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 RAD9AQ99638 391 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF696Q9H7X3 374 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 UBE2J1Q9Y385 318 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 GGT3PA6NGU5 568 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 DENRO43583 198 aaKnown RBP12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 PNMTP11086 282 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 AHRP35869 848 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 MAGEA6P43360 314 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 UGT2A3Q6UWM9 527 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 KBTBD6Q86V97 674 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM173Q86WV6 379 aaPredicted RBP12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
TGFBR3-201ENST00000212355 LOC105369274A0A096LPK9 316 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 A0A0A6YYC8 382 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 I3L1I5 382 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 DPP6P42658 865 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 GAB1Q13480 694 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 PPA1Q15181 289 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 OR4N4Q8N0Y3 316 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 ACBD7Q8N6N7 88 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 DCUN1D4Q92564 292 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 RHBDF1Q96CC6 855 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 WASF3Q9UPY6 502 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 UCHL1P09936 223 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 C21orf33P30042 268 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 CTHP32929 405 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 SPCS2Q15005 226 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 ARL14Q8N4G2 192 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 CREB3L1Q96BA8 519 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 L3HYPDHQ96EM0 354 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 CCNL2Q96S94 520 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 CACNG6Q9BXT2 260 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 ACPTQ9BZG2 426 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 TMEM9Q9P0T7 183 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 FNIP2Q9P278 1114 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 C19orf25Q9UFG5 118 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 GABRR3A8MPY1 467 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 GSRP00390 522 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 PLP2Q04941 152 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 LARP4Q71RC2 724 aaKnown RBP eCLIP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 BACE2Q9Y5Z0 518 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 IRS2Q9Y4H2 1338 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 RETP07949 1114 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 CD79AP11912 226 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 SLC6A11P48066 632 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 PITPNBP48739 271 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 CLCN2P51788 898 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 LRRC18Q8N456 261 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 FAM83FQ8NEG4 500 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 PCDHGB6Q9Y5F9 930 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 H3BNC9 293 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 HPRP00739 348 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 RPS5P46782 204 aaKnown RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 RGRP47804 291 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 RPS15AP62244 130 aaKnown RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 MAT1AQ00266 395 aaKnown RBP12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 OR7A5Q15622 319 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 SERINC5Q86VE9 423 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 OR14L1PQ8NHC6 308 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 RLN3Q8WXF3 142 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 C2orf42Q9NWW7 574 aa12.87□□□□□ -0.35
TGFBR3-201ENST00000212355 H7C1C5 153 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 NUDT7P0C024 238 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 ZNF865P0CJ78 1059 aaPredicted RBP12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 GCAP28676 217 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 GRIA2P42262 883 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 GPR143P51810 404 aa12.86□□□□□ -0.35
TGFBR3-201ENST00000212355 LCN6P62502 163 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms