RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CNOT2Q9NZN8 540 aaKnown RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 STUB1Q9UNE7 303 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 MGAT4BQ9UQ53 548 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 SLC9A8Q9Y2E8 581 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 NCR1O76036 304 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 TMEM35AQ53FP2 167 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 SMUG1Q53HV7 270 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 CCNJQ5T5M9 372 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 PHC2Q8IXK0 858 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 SLC16A11Q8NCK7 471 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 NELL2Q99435 816 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 SRRQ9GZT4 340 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 SLC28A3Q9HAS3 691 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 SLC25A19Q9HC21 320 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 TXNL4BQ9NX01 149 aaKnown RBP12.31□□□□□ -0.44
CTNS-201ENST00000046640 CLCA3PQ9Y6N3 262 aa12.31□□□□□ -0.44
CTNS-201ENST00000046640 DSPPQ9NZW4 1301 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 NOTOA8MTQ0 251 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 RGS13O14921 159 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 PROM1O43490 865 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 TBX19O60806 448 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 TAS2R41P59536 307 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 ARPC4P59998 168 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 RPS25P62851 125 aaKnown RBP12.3□□□□□ -0.44
CTNS-201ENST00000046640 ILKQ13418 452 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 INSL4Q14641 139 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 CRTC2Q53ET0 693 aaPredicted RBP12.3□□□□□ -0.44
CTNS-201ENST00000046640 Q5BKY6 102 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 SLC48A1Q6P1K1 146 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 FAM111BQ6SJ93 734 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 C16orf62Q7Z3J2 963 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 VN1R4Q7Z5H5 301 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 TTLQ8NG68 377 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 OTULINQ96BN8 352 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 LRR1Q96L50 414 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 MND1Q9BWT6 205 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 LSM2Q9Y333 95 aaKnown RBP12.3□□□□□ -0.44
CTNS-201ENST00000046640 ZNF780BQ9Y6R6 833 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 GPR89AB7ZAQ6 455 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 MPZL2O60487 215 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 CPNE3O75131 537 aaKnown RBP12.3□□□□□ -0.44
CTNS-201ENST00000046640 GPR89BP0CG08 455 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 F3P13726 295 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 APEX1P27695 318 aaKnown RBP12.3□□□□□ -0.44
CTNS-201ENST00000046640 MPIP34949 423 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 CD79BP40259 229 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 ETV6P41212 452 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 SCN1BQ07699 218 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 C1DQ13901 141 aaKnown RBP12.3□□□□□ -0.44
CTNS-201ENST00000046640 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 C19orf48Q6RUI8 117 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 NATD1Q8N6N6 113 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 ATP6V1C2Q8NEY4 427 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 ELP4Q96EB1 424 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 SMAD5Q99717 465 aaKnown RBP12.3□□□□□ -0.44
CTNS-201ENST00000046640 MIXL1Q9H2W2 232 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 SEC14L4Q9UDX3 406 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 SLC13A4Q9UKG4 626 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 SPTBP11277 2137 aa12.3□□□□□ -0.44
CTNS-201ENST00000046640 A0A075B6Q4 140 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 LOC105369274A0A096LPK9 316 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 LOC102723532A0A0G2JNH3 316 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 FAM172BPA6NC97 362 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 OR6C70A6NIJ9 312 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 ZNF670-ZNF695F2Z2N8 137 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 P2RX6O15547 441 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 CTSVO60911 334 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 TP53P04637 393 aaPredicted RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 CSF3P09919 207 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 DDX5P17844 614 aaKnown RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 TRHRP34981 398 aaPredicted RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 RFX3P48380 749 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 PDX1P52945 283 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 SNRPD2P62316 118 aaKnown RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 TGM3Q08188 693 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 SNAPC1Q16533 368 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 FLYWCH1Q4VC44 716 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 MRM1Q6IN84 353 aaKnown RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 PRSS41Q7RTY9 318 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 PRICKLE2Q7Z3G6 844 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 LHFPL3Q86UP9 236 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 OR4N4Q8N0Y3 316 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 NANOGP1Q8N7R0 232 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 FAM46AQ96IP4 442 aaKnown RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 GFM1Q96RP9 751 aaKnown RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 C3orf14Q9HBI5 128 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 STARD5Q9NSY2 213 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 ENOPH1Q9UHY7 261 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 CES1P1Q9UKY3 287 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 RPL36Q9Y3U8 105 aaKnown RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 MN1Q10571 1320 aaPredicted RBP12.29□□□□□ -0.44
CTNS-201ENST00000046640 A0A087WUU8 490 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 SLC35F4A4IF30 521 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 A8MVJ9 347 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 LGI1O95970 557 aa12.29□□□□□ -0.44
CTNS-201ENST00000046640 ACADMP11310 421 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms