RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 FGL2Q14314 439 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TARBP2Q15633 366 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 CUTCQ9NTM9 273 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ROBO1Q9Y6N7 1651 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TAF1LQ8IZX4 1826 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 XKRY2A2RUG3 117 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 F5H5P2 479 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TAAR5O14804 337 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 SFTPBP07988 381 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PRKCAP17252 672 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 IGFBP4P22692 258 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TSFMP43897 325 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 F2RL1P55085 397 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 MTPNP58546 118 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 VGLL4Q14135 290 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GPR68Q15743 365 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 C6orf141Q5SZD1 244 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PAPD4Q6PIY7 484 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 STT3BQ8TCJ2 826 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CDCA3Q99618 268 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PIGQQ9BRB3 760 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 SAMD10Q9BYL1 202 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 FAM117AQ9C073 453 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 SAP130Q9H0E3 1048 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR10A5Q9H207 317 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR10A2Q9H208 303 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 BPIFA1Q9NP55 256 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GNG13Q9P2W3 67 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 KIAA1551Q9HCM1 1747 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PLCH1Q4KWH8 1693 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR4F21O95013 312 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PCCBP05166 539 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GALTP07902 379 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GAAP10253 952 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TAS2R40P59535 323 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 LTB4RQ15722 352 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 LBHQ53QV2 105 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PPM1JQ5JR12 505 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CLEC12AQ5QGZ9 265 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ARHGAP40Q5TG30 622 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 LCTLQ6UWM7 567 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 VITQ6UXI7 678 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ESX1Q8N693 406 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CDK15Q96Q40 435 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ZDHHC18Q9NUE0 388 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 A0A1W2PPL8 197 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 E7ESA3 106 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF217O75362 1048 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CSTAP01040 98 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CHRNB1P11230 501 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ACPPP15309 386 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 IL13RA1P78552 427 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 COTL1Q14019 142 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 AGTRAPQ6RW13 159 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 WDR5BQ86VZ2 330 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 SSX3Q99909 188 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PCDHGA5Q9Y5G8 931 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CREBBPQ92793 2442 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CELP19835 753 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GNRHRP30968 328 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GCGRP47871 477 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 NOXRED1Q6NXP6 359 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM53Q6P2H8 277 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 EGFL6Q8IUX8 553 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 STK35Q8TDR2 534 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 XIRP1Q702N8 1843 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 LRP6O75581 1613 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 FREM1Q5H8C1 2179 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 APOC3P02656 99 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ELK1P19419 428 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 NMBRP28336 390 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CHRNA4P43681 627 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM244Q5VVB8 128 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CCBE1Q6UXH8 406 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 NPNTQ6UXI9 565 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 LACC1Q8IV20 430 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CLDN22Q8N7P3 220 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR10T2Q8NGX3 314 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ARID2Q68CP9 1835 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 RAB3AP20336 220 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 PTGIRP43119 386 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GPR50Q13585 617 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 RETREG3Q86VR2 466 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR56B1Q8NGI3 324 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 GLYATL2Q8WU03 294 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM174Q8WUU8 243 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 OR1E3Q8WZA6 343 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TFGQ92734 400 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 SNX18Q96RF0 628 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 SPACA1Q9HBV2 294 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 LYRM2Q9NU23 88 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 COQ3Q9NZJ6 369 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 BCORQ6W2J9 1755 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 TTC24A2A3L6 582 aaPredicted RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 HAS3O00219 553 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 BHLHE40O14503 412 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 IMPA2O14732 288 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 ADAM12O43184 909 aa5.78□□□□□ -1.48
VPS13D-201ENST00000011700 RPL13AP40429 203 aaKnown RBP5.78□□□□□ -1.48
VPS13D-201ENST00000011700 CX3CR1P49238 355 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms