RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Ccdc126Q8BIS8 140 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 E330021D16RikQ8BW45 371 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 ExogQ8C163 368 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Wdr37Q8CBE3 496 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Prokr2Q8K458 381 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Clec14aQ8VCP9 459 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Tmem45bQ8VCZ2 278 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 TympQ99N42 471 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Fam32aQ9CR80 112 aaKnown RBP12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 HhatlQ9D1G3 503 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 HnrnpfQ9Z2X1 415 aaKnown RBP12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Vmn1r10W4VSP8 311 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ankle1A8VU90 534 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Lrr1D3YY91 422 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Gm609E9Q573 300 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 C1orf109Q499E6 217 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 OclnQ61146 521 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Serpinf2Q61247 491 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr1307Q7TQX1 312 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Znf516Q7TSH3 1157 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Atg4bQ8BGE6 393 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Slitrk6Q8C110 840 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr1033Q8VFK5 310 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr541Q8VGM0 312 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ubqln2Q9QZM0 638 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Adam25Q9R159 760 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Sema4gQ9WUH7 837 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ramp2Q9WUP0 189 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Srd5a3Q9WUP4 330 aa12.63□□□□□ -0.39
Rnf4-204ENSMUST00000182047 A430033K04RikE9Q8G5 680 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 EmdO08579 259 aaKnown RBP12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 PlauP06869 433 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ly6fP35460 134 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 CntfP51642 198 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 TstP52196 297 aaKnown RBP12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Tas2r7P59530 312 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 C1qaP98086 245 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Hoxc4Q08624 264 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Znf728Q6P5C7 752 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Mospd3Q8BGG6 235 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Fam92aQ8BP22 355 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Rgs7bpQ8BQP9 257 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Gramd1cQ8CI52 457 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Lrrc49Q91YK0 686 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Sec23bQ9D662 767 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Isoc2bQ9DCC7 210 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ptges3Q9R0Q7 160 aaKnown RBP12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Gm16432A0A0A6YXX9 775 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 1700028J19RikA0A0U1RP08 172 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Gm8127E9Q0P0 100 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Gm8094K7N6U8 211 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Psmc3ipO35047 217 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Sox6P40645 827 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Btbd3P58545 530 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ppp1caP62137 330 aaKnown RBP12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 SctQ08535 133 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Kcnk6Q3TBV4 313 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Slc30a10Q3UVU3 470 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Cep44Q5HZK1 386 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Gm5416Q6IE28 97 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Mapre3Q6PER3 281 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr1318Q7TQW6 320 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Slc39a9Q8BFU1 308 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 SynbQ8BI41 618 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Derl2Q8BNI4 239 aaKnown RBP12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Peli2Q8BST6 419 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Kcnk10Q8BUW1 535 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Zbtb49Q8BXX2 756 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Q8C3I9 435 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Yipf4Q8C407 246 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 NclnQ8VCM8 563 aaKnown RBP12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr1317Q8VF84 316 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Nkd1Q99MH6 471 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Khdrbs3Q9R226 346 aaKnown RBP12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Creb3l1Q9Z125 519 aa12.62□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Zfp40B1B1D3 796 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Pgbd5D3YZI9 523 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Prr22F6TNE3 422 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ido1P28776 407 aaKnown RBP12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Dlx5P70396 289 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Hsf5Q5ND04 624 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Xrcc1Q60596 631 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ldoc1Q7TPY9 151 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr1308Q7TQX0 320 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr128Q7TRJ1 308 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 B4gat1Q8BWP8 415 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Slc5a8Q8BYF6 611 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Fbxl22Q8C7B6 236 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Pramef8Q8CE24 480 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Q8K039 155 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 AmnQ99JB7 458 aaKnown RBP12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Mzt2Q9CQ25 159 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 NepnQ9CQ76 512 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Stx11Q9D3G5 287 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Cmpk1Q9DBP5 196 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Arpc3Q9JM76 178 aaKnown RBP12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 AtmQ62388 3066 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Vmn1r177E9PXM3 309 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Olfr549E9Q542 316 aa12.61□□□□□ -0.39
Rnf4-204ENSMUST00000182047 Ntrk2P15209 821 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms