RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Borcs5Q9D920 195 aa19.79■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Ninj2Q9JL89 143 aa19.79■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Tcea2Q9QVN7 299 aa19.79■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Prune2Q52KR3 3084 aa19.79■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Golga4Q91VW5 2238 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Rdh19G5E8H9 318 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Slc22a8O88909 537 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 NadkP58058 439 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Zfp36l3Q5ISE2 725 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Timd4Q6U7R4 343 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Tas2r106Q7M724 308 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Plekha6Q7TQG1 1173 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Palm2Q8BR92 376 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Rab36Q8CAM5 267 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Brinp1Q920P3 760 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Slc19a3Q99PL8 488 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Timm22Q9CQ85 194 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Olfr44Q9EQB8 314 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Actr10Q9QZB7 417 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Atp6v1g2Q9WTT4 118 aa19.78■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 CercamA3KGW5 592 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 SvaE9PX96 165 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Rhox13F6YCR7 232 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 2410141K09RikK7N769 464 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Olfr209L7N1X3 305 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Tgfb1P04202 390 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 OtcP11725 354 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Pcp2P12660 120 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 CtsaP16675 474 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Cxcl10P17515 98 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Crhr1P35347 415 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Epb41P48193 858 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Limk1P53668 647 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Agbl4Q09LZ8 540 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Sorbs2Q3UTJ2 1180 aaKnown RBP19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Il12rb1Q60837 738 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Runx1t1Q61909 577 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Rundc3bQ6PDC0 408 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Catsper3Q80W99 395 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Peli2Q8BST6 419 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Fam46bQ8C152 427 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Fbxl22Q8C7B6 236 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 ZxdcQ8C8V1 858 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Olfr812Q8VG64 310 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Slc7a13Q91WN3 478 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Dcbld2Q91ZV3 769 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Chrm5Q920H4 532 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Acss1Q99NB1 682 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 DenrQ9CQJ6 198 aaKnown RBP19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Dhrs7Q9CXR1 338 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Maf1Q9D0U6 258 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Cthrc1Q9D1D6 245 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Olfr938Q9EQ93 315 aa19.77■□□□□ 0.76
Ccdc88a-202ENSMUST00000109477 Slc9a6A1L3P4 702 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 CK137956B1AYM9 596 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr631F8VPJ9 319 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Mapk12O08911 367 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tulp3O88413 460 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 H2-T3P14432 384 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gria1P23818 907 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Hoxc11P31313 304 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Idh2P54071 452 aaKnown RBP19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Teddm2Q208S0 260 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Nell1Q2VWQ2 810 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Adrbk2Q3UYH7 688 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc27a5Q4LDG0 689 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc39a12Q5FWH7 689 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Cd34Q64314 382 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Krt72Q6IME9 520 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Prrg3Q6PAQ9 231 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Chst2Q80WV3 530 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ppp1r8Q8R3G1 351 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 FggQ8VCM7 436 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rbm18Q9CR83 190 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Tmed5Q9CXE7 229 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Sh3glb1Q9JK48 365 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 HgfacQ9R098 653 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Rhox2dW4VSN9 191 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm6592A2AHC7 168 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Zfp442A2AQA0 667 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc22a28B2RT89 552 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Olfr605E9Q838 314 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 1700080E11RikE9Q9G1 206 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Gm19965J3QNY8 723 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Vmn2r45L7N2B5 852 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Scarb2O35114 478 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Ulk1O70405 1051 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Hipk1O88904 1210 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Nudt19P11930 357 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 StarP51557 284 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 CntfP51642 198 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Lbx1P52955 282 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 2410002F23RikQ3TE80 284 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc17a4Q5NCM1 492 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Slc30a1Q60738 503 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Map4k2Q61161 821 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Spaca9Q7TPM5 168 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Hs3st5Q8BSL4 346 aa19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 SynpoQ8CC35 929 aaKnown RBP19.76■□□□□ 0.75
Ccdc88a-202ENSMUST00000109477 Galnt18Q8K1B9 622 aa19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms