RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Gm17728E9Q5K2 132 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Sult2b1O35400 338 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Bcat2O35855 393 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gpld1O70362 837 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 EpxP49290 716 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Uck1P52623 277 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cdh5P55284 784 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Nudt2P56380 147 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ucp3P56501 308 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ctu2Q3U308 514 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Pdap1Q3UHX2 181 aaKnown RBP21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cnrip1Q5M8N0 164 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Defa17Q64016 82 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Q810M1 233 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Yod1Q8CB27 343 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gramd1cQ8CI52 457 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Iglon5Q8HW98 336 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Q9D4G1 230 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Dbf4Q9QZ41 663 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cldn14Q9Z0S3 239 aa21.2■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Btbd2E9PUS2 523 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 1700017D01RikG5E851 209 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Mapk12O08911 367 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Sh2d1bO35324 132 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 LynP25911 512 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gbx2P48031 348 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Nat3P50296 290 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gdpgp1Q3TLS3 386 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ankrd13bQ5F259 626 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Nr2f1Q60632 422 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 AktipQ64362 292 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Mfsd4aQ6PDC8 510 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cd3eapQ76KJ5 399 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Znf503Q7TMA2 652 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Chst14Q80V53 376 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Larp4Q8BWW4 719 aaKnown RBP21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Fam46bQ8C152 427 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Q8VDP2 222 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 TardbpQ921F2 414 aaKnown RBP21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ifi44lQ9BDB7 447 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Ist1Q9CX00 362 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Nudt22Q9DD16 308 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Slco1c1Q9ERB5 715 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Tas2r103Q9JKA3 312 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Dchs2A0A0A6YW72 3346 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr1006A2ALD2 312 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Rad21l1A2AU37 552 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 TriqkB2B9E1 86 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cdh19E9Q3A7 770 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Vmn2r56E9Q4U5 779 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Vmn2r51L7N215 852 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 ArafP04627 604 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Evx2P49749 475 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cdh26P59862 763 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Lemd1Q14C37 129 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Sorbs2Q3UTJ2 1180 aaKnown RBP21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Pla2g7Q60963 440 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Cyp4b1Q64462 511 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Pik3c3Q6PF93 887 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Vmn2r81Q80Z09 865 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Mon1bQ8BMQ8 553 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Slc5a8Q8BYF6 611 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Trim31Q8R0K2 507 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Vmn1r24Q8R2D6 296 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr881Q8VF63 314 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Pcdhga12Q91XY7 932 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 PglsQ9CQ60 257 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 NarfQ9CYQ7 462 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Fbxl20Q9CZV8 436 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Pbdc1Q9D0B6 198 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Spaca1Q9DA48 305 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Tcea2Q9QVN7 299 aa21.19■□□□□ 0.98
Scn1b-201ENSMUST00000098548 BptfA2A654 3036 aaKnown RBP21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Gm13539A0A1B0GSM6 183 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Tas2r122D3YU55 309 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr1249L7MU51 318 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Clk4O35493 481 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Mtx2O88441 263 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Avpr2O88721 371 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 EsrrgP62509 458 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Rnf224Q3UIW8 156 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Il12rb1Q60837 738 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 PmlQ60953 885 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Olfr169Q7TS53 313 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Kcmf1Q80UY2 381 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Chst2Q80WV3 530 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Fam69cQ8BQT2 410 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 EloaQ8CB77 773 aaKnown RBP21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Tmem125Q8CHQ6 216 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Sdr9c7Q8K3P0 313 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Clrn1Q8K445 232 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Brinp1Q920P3 760 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Grip1Q925T6 1127 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Slc25a30Q9CR58 291 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Twist2Q9D030 160 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Q9D3J9 298 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Spag17Q5S003 2320 aa21.18■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Tnfrsf25B1AWN9 411 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Vmn2r105E9Q3A5 860 aa21.17■□□□□ 0.98
Scn1b-201ENSMUST00000098548 Vmn2r35E9Q7U8 861 aa21.17■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms