RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Bst2Q8R2Q8 172 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 RhovQ8VDU1 236 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Oasl1Q8VI94 511 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Yipf1Q91VU1 306 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 BollQ924M5 281 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Otud1Q9CUB6 454 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 GrapQ9CX99 217 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cmss1Q9CZT6 276 aaKnown RBP9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Stx11Q9D3G5 287 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Lurap1Q9D6I9 239 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Smg9Q9DB90 520 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Inpp5eQ9JII1 647 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rpl38Q9JJI8 70 aaKnown RBP9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ggps1Q9WTN0 300 aa9.22□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm8797A0A0A6YW67 77 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dmrta2A2A9A2 531 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Mgl2A9XX86 381 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cped1B2RX70 1026 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 AsmtD3KU66 387 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Slc38a6G3UVW3 457 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr936J3KMV2 267 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gm10721J3QPJ9 223 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 UgdhO70475 493 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Il5P04401 133 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 UbbP0CG49 305 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 UbcP0CG50 734 aaKnown RBP9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Mup4P11590 178 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ifngr1P15261 477 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Hmgn1P18608 96 aaKnown RBP9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 GdnfP48540 211 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ca10P61215 328 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rps27aP62983 156 aaKnown RBP9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Uba52P62984 128 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tbx4P70325 552 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 AurkaP97477 395 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Rnf180Q3U827 592 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Foxred2Q3USW5 665 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gramd2aQ3V3G7 320 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 5730522E02RikQ5SP45 163 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Ubtd2Q6PGH0 234 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr1288Q7TQY0 312 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 JamlQ80UL9 379 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 LipkQ8BM14 398 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 A930004D18RikQ8C8W7 157 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Dnajc27Q8CFP6 273 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 FkrpQ8CG64 494 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Lrrc20Q8CI70 184 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Oas1gQ8K469 367 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tmem268Q8R239 342 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cadm1Q8R5M8 456 aaKnown RBP9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Nt5mQ8VCE6 220 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Abhd4Q8VD66 342 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr99Q8VFE4 305 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Olfr385Q8VGT1 312 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Gpr37l1Q99JG2 481 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Wdr6Q99ME2 1125 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Zswim7Q9CWQ2 152 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Cldnd2Q9D9H2 167 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Tas2r119Q9JKT2 335 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Epb41l4bQ9JMC8 527 aa9.21□□□□□ -0.93
Hmgb1-201ENSMUST00000085546 Adh6bA0A1D5RMB0 384 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Kdf1A2A9F4 397 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rhox3fA2ANE1 215 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rhox3cA2AWM0 215 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm8765B7ZWJ3 1017 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rhox3gB9EJQ9 160 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm3543D3Z235 184 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Fmo6J3QMN6 532 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rhox3hL7MU37 215 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 E2f3O35261 457 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 SfnO70456 248 aaKnown RBP9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 BlkP16277 499 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Wnt4P22724 351 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 HexaP29416 528 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Slc6a13P31649 602 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Irs1P35569 1233 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Sstr4P49660 385 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mc1rQ01727 315 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 RykQ01887 594 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Smpd1Q04519 627 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Col9a2Q07643 688 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Gm906Q3V0M1 1017 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rhox3aQ4TU90 215 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Laptm4aQ60961 233 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Zfp90Q61967 636 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Prss34Q80UR4 318 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Cpeb2Q812E0 521 aaKnown RBP9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Rell2Q8BRJ3 303 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Prr33Q8C494 260 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 EndovQ8C9A2 338 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Lamtor4Q8CF66 99 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Dmrta1Q8CFG4 490 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Flywch1Q8CI03 673 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Zdhhc3Q8R173 299 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Vmn1r84Q8R284 318 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Slc2a10Q8VHD6 536 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Asb17Q8VHP9 295 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Slc12a9Q99MR3 914 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 OoepQ9CWE6 164 aa9.21□□□□□ -0.94
Hmgb1-201ENSMUST00000085546 Mpc2Q9D023 127 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms