RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 C6orf120Q7Z4R8 191 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PPP1R32Q7Z5V6 425 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 RNF130Q86XS8 419 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 SIMC1Q8NDZ2 872 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 NUP43Q8NFH3 380 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 FBXO30Q8TB52 745 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 DAZLQ92904 295 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 TMEM125Q96AQ2 219 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 CTHRC1Q96CG8 243 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 NEURL3Q96EH8 262 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 FBXL20Q96IG2 436 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 ART5Q96L15 291 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 FER1L6-AS2Q96M78 137 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 IP6K3Q96PC2 410 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 BARD1Q99728 777 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 SH3GL1Q99961 368 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 WDR77Q9BQA1 342 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 THUMPD3Q9BV44 507 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 OR8D2Q9GZM6 311 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 EPS8L2Q9H6S3 715 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 NANOGQ9H9S0 305 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 TPT1P8Q9HAU6 139 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 EQTNQ9NQ60 294 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 GPATCH2Q9NW75 528 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 CMTM6Q9NX76 183 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 ADA2Q9NZK5 511 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 ABCD2Q9UBJ2 740 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 BCAP29Q9UHQ4 241 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF639Q9UID6 485 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 PRPF19Q9UMS4 504 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 C19orf53Q9UNZ5 99 aaPredicted RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 CORO2BQ9UQ03 480 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 L3MBTL1Q9Y468 752 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 HS3ST3B1Q9Y662 390 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.71□□□□□ -1.02
PHGDH-228ENST00000641847 CCDC88CQ9P219 2028 aa8.71□□□□□ -1.02
PHGDH-228ENST00000641847 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 IGHV1-45A0A0A0MS14 117 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 PEX12O00623 359 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 NME6O75414 186 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 PDE5AO76074 875 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 NADKO95544 446 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 CLPSP04118 112 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 HMGN2P05204 90 aaKnown RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 ETFAP13804 333 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 HTR1EP28566 365 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 PRIM2P49643 509 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 KHKP50053 298 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 FUT7Q11130 342 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 SSPNQ14714 243 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 LASP1Q14847 261 aaKnown RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 TESK1Q15569 626 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 CYP51A1Q16850 503 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 COX20Q5RI15 118 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 MFSD12Q6NUT3 480 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 RNF111Q6ZNA4 994 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 ASRGL1Q7L266 308 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 CDH24Q86UP0 819 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 SLC15A3Q8IY34 581 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 C10orf111Q8N326 155 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF321PQ8N8H1 164 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 MORN4Q8NDC4 146 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 B3GNT7Q8NFL0 401 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 OR7G1Q8NGA0 311 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 OR52N2Q8NGI0 321 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 ADAMTS17Q8TE56 1095 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF721Q8TF20 911 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 JADE3Q92613 823 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 NCLNQ969V3 563 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 MCUR1Q96AQ8 359 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 GIMAP5Q96F15 307 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 OTUB1Q96FW1 271 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 C16orf58Q96GQ5 468 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 CDRT15Q96T59 188 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 LPAR4Q99677 370 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 THTPAQ9BU02 230 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 CADM1Q9BY67 442 aaKnown RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 ZNF700Q9H0M5 742 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 OR10A5Q9H207 317 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 RAD21L1Q9H4I0 556 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 SERHL2Q9H4I8 314 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 NTMQ9P121 344 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 TMEM181Q9P2C4 612 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 COPS7AQ9UBW8 275 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 PACSIN3Q9UKS6 424 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 FAF1Q9UNN5 650 aaPredicted RBP8.7□□□□□ -1.02
PHGDH-228ENST00000641847 AP3M1Q9Y2T2 418 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 GMEB1Q9Y692 573 aa8.7□□□□□ -1.02
PHGDH-228ENST00000641847 PKDREJQ9NTG1 2253 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 PCSK5Q92824 1860 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 A0A1W2PQ72 361 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 FAM220BPB1ANY3 271 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 GSC2O15499 205 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 DNAJA2O60884 412 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 BCAS2O75934 225 aaPredicted RBP8.69□□□□□ -1.02
PHGDH-228ENST00000641847 IGKV3-11P04433 115 aa8.69□□□□□ -1.02
PHGDH-228ENST00000641847 STSP08842 583 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms