RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ZNF155Q12901 538 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 ILKQ13418 452 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 TAF11Q15544 211 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 HEPHL1Q6MZM0 1159 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 ZBTB49Q6ZSB9 765 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 PIWIL3Q7Z3Z3 882 aaKnown RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 KRT73Q86Y46 540 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 PRSS58Q8IYP2 241 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 GALNT4Q8N4A0 578 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 SMYD1Q8NB12 490 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 C7orf57Q8NEG2 295 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 C7orf34Q96L11 122 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF578Q96N58 590 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 COL21A1Q96P44 957 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 TRNT1Q96Q11 434 aaKnown RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 STACQ99469 402 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CIB1Q99828 191 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 C9orf16Q9BUW7 83 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CNPPD1Q9BV87 410 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 TGIF2Q9GZN2 237 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 VCXQ9H320 206 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 PIGUQ9H490 435 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 FOLH1BQ9HBA9 442 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 FBXO8Q9NRD0 319 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 PNO1Q9NRX1 252 aaKnown RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CALML5Q9NZT1 146 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CTSFQ9UBX1 484 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CNOT11Q9UKZ1 510 aaKnown RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 BAG5Q9UL15 447 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 OAZ3Q9UMX2 235 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 ABCG2Q9UNQ0 655 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 HEMK1Q9Y5R4 338 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 GPC6Q9Y625 555 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 UNC79Q9P2D8 2635 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 IGLV3-12A0A075B6K2 115 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 A8MUA0 341 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 A8MVJ9 347 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 C17orf105B2RV13 164 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 ACOX3O15254 700 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 RECKO95980 971 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 SPTBP11277 2137 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 ETS2P15036 469 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF26P17031 533 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-221ENST00000641573 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 RORAP35398 523 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 MAP3K8P41279 467 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 PGDP52209 483 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 EFNA3P52797 238 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 HPCAP84074 193 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 OCA2Q04671 838 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 SRSF1Q07955 248 aaKnown RBP eCLIP12.18□□□□□ -0.462e-10■■■□□ 18.2
PHGDH-221ENST00000641573 FUT7Q11130 342 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 ARHGAP11BQ3KRB8 267 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 CYP27C1Q4G0S4 372 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF385CQ66K41 422 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-221ENST00000641573 PPP4R4Q6NUP7 873 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 EPHX4Q8IUS5 362 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 TMEM151BQ8IW70 566 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 CBR4Q8N4T8 237 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 STT3BQ8TCJ2 826 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 RASSF5Q8WWW0 418 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 GEMIN6Q8WXD5 167 aaKnown RBP12.18□□□□□ -0.46
PHGDH-221ENST00000641573 HOXB13Q92826 284 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-221ENST00000641573 TMBIM1Q969X1 311 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 SLC29A1Q99808 456 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 LMF2Q9BU23 707 aaKnown RBP12.18□□□□□ -0.46
PHGDH-221ENST00000641573 SPATA5L1Q9BVQ7 753 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 BTBD2Q9BX70 525 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 VN1R1Q9GZP7 353 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 DUSP22Q9NRW4 184 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 AKAP7Q9P0M2 348 aaPredicted RBP12.18□□□□□ -0.46
PHGDH-221ENST00000641573 SEC14L3Q9UDX4 400 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 MKL2Q9ULH7 1088 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 ERVK-19Q9WJR5 959 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 PCDHGB3Q9Y5G1 929 aa12.18□□□□□ -0.46
PHGDH-221ENST00000641573 SCN2AQ99250 2005 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 TCRBV16S1A1N1A0A5B0 115 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 B4E171 279 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 TMX2-CTNND1H3BSU7 103 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 PDLIM1O00151 329 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 SOCS2O14508 198 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 PRAMEF2O60811 474 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 CPNE3O75131 537 aaKnown RBP12.17□□□□□ -0.46
PHGDH-221ENST00000641573 DIRAS1O95057 198 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 NKX2-2O95096 273 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 FESP07332 822 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 ZGLP1P0C6A0 271 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF23P17027 643 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 GABRA3P34903 492 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 TSPAN7P41732 249 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 KCNJ5P48544 419 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 EMDP50402 254 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 INSM1Q01101 510 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-221ENST00000641573 CHRNEQ04844 493 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 NSDHLQ15738 373 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 DUSP7Q16829 419 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 IQCCQ4KMZ1 466 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 WLSQ5T9L3 541 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 MLIPQ5VWP3 458 aa12.17□□□□□ -0.46
PHGDH-221ENST00000641573 OR2T5Q6IEZ7 315 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms