RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PRAMEF20Q5VT98 475 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 BICRALQ6AI39 1079 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TNFAIP8L2Q6P589 184 aaPredicted RBP12.14□□□□□ -0.47
GTF3A-209ENST00000640289 SNX32Q86XE0 403 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 RNF130Q86XS8 419 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 HORMAD2Q8N7B1 307 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 POU5F2Q8N7G0 328 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 COX18Q8N8Q8 333 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 PAQR8Q8TEZ7 354 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TSPEARQ8WU66 669 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 HGDQ93099 445 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TMEM125Q96AQ2 219 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 C5orf34Q96MH7 638 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 OR7D2Q96RA2 312 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 NODALQ96S42 347 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 ADOQ96SZ5 270 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 PIGUQ9H490 435 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 SH2D2AQ9NP31 389 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 TIMMDC1Q9NPL8 285 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 DUSP22Q9NRW4 184 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 DEPPQ9NTK1 212 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 MRGBPQ9NV56 204 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 FBXO34Q9NWN3 711 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 SLC25A37Q9NYZ2 338 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 ARL2BPQ9Y2Y0 163 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
GTF3A-209ENST00000640289 A0A0G2JMM0 328 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 A0A1W2PPB8 328 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 A0A1W2PRS3 328 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 KIR3DP1A8MWS1 328 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 CAPN14A8MX76 684 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 KCNK2O95069 426 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 KCNH1O95259 989 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 OR12D1P0DN82 309 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 CYP4B1P13584 511 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 NAGAP17050 411 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 IL12BP29460 328 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 ADSLP30566 484 aaPredicted RBP12.13□□□□□ -0.47
GTF3A-209ENST00000640289 KRT20P35900 424 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 PIGAP37287 484 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 MVDP53602 400 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 POU6F2P78424 691 aaPredicted RBP12.13□□□□□ -0.47
GTF3A-209ENST00000640289 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
GTF3A-209ENST00000640289 PMP22Q01453 160 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 DECR1Q16698 335 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 CYP27C1Q4G0S4 372 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 PRR30Q53SZ7 412 aaPredicted RBP12.13□□□□□ -0.47
GTF3A-209ENST00000640289 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.13□□□□□ -0.47
GTF3A-209ENST00000640289 SLC22A10Q63ZE4 541 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 FIGNL1Q6PIW4 674 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 DLEU7Q6UYE1 221 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 OLIG3Q7RTU3 272 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 ZAR1Q86SH2 424 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
GTF3A-209ENST00000640289 GOLM1Q8NBJ4 401 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 TMEM178AQ8NBL3 297 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 SPPL2AQ8TCT8 520 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 MIPOL1Q8TD10 442 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 DIO2Q92813 273 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 RAB8BQ92930 207 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 SGCZQ96LD1 299 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 COL21A1Q96P44 957 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 STACQ99469 402 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 TPT1P8Q9HAU6 139 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 IL1RL2Q9HB29 575 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 SACM1LQ9NTJ5 587 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 GIN1Q9NXP7 522 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 FLRT3Q9NZU0 649 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 VAPAQ9P0L0 249 aa12.13□□□□□ -0.47
GTF3A-209ENST00000640289 CNOT11Q9UKZ1 510 aaKnown RBP12.13□□□□□ -0.47
GTF3A-209ENST00000640289 TRBV5-3A0A0A0MS03 114 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PINLYPA6NC86 204 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 OR6C70A6NIJ9 312 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 HMGN4O00479 90 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 TP53I11O14683 189 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 SLC22A2O15244 555 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PEX1O43933 1283 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 UNC5CO95185 931 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 KRT75O95678 551 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 IL33O95760 270 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 P04436 131 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 KRT16P08779 473 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 COX4I1P13073 169 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 DNASE1L1P49184 302 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 MEOX1P50221 254 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PNLIPRP2P54317 469 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PSPHP78330 225 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 CYLC2Q14093 348 aaPredicted RBP12.12□□□□□ -0.47
GTF3A-209ENST00000640289 MAPRE2Q15555 327 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 DCST2Q5T1A1 773 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 GKAP1Q5VSY0 366 aaPredicted RBP12.12□□□□□ -0.47
GTF3A-209ENST00000640289 REP15Q6BDI9 236 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 NUP54Q7Z3B4 507 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
GTF3A-209ENST00000640289 DHDDSQ86SQ9 333 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 FBXW8Q8N3Y1 598 aa12.12□□□□□ -0.47
GTF3A-209ENST00000640289 ZNF843Q8N446 348 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms