RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 MSANTD3Q96H12 275 aa15.74■□□□□ 0.11
SCARB2-210ENST00000638567 MBOAT4Q96T53 435 aa15.74■□□□□ 0.11
SCARB2-210ENST00000638567 ALG8Q9BVK2 526 aa15.74■□□□□ 0.11
SCARB2-210ENST00000638567 SLC6A15Q9H2J7 730 aa15.74■□□□□ 0.11
SCARB2-210ENST00000638567 NUDT15Q9NV35 164 aa15.74■□□□□ 0.11
SCARB2-210ENST00000638567 TRIM3O75382 744 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 LDOC1O95751 146 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ATP5A1P25705 553 aaKnown RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 MGAT3Q09327 533 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ARFRP1Q13795 201 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ATXN7L3Q14CW9 347 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 CST6Q15828 149 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 WDR20Q8TBZ3 569 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ZNF296Q8WUU4 475 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 SLC38A5Q8WUX1 472 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 HYLS1Q96M11 299 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 PRRC1Q96M27 445 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 C1QTNF3Q9BXJ4 246 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 PIGUQ9H490 435 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 TMEM184CQ9NVA4 438 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 CXXC1Q9P0U4 656 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 HS3ST2Q9Y278 367 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ZNF432O94892 652 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 OR3A3P47888 321 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 OR3A2P47893 321 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 MASP1P48740 699 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 CAV3P56539 151 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 RAB40BQ12829 278 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ITPRIPL2Q3MIP1 535 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 FCRLBQ6BAA4 426 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ACOT4Q8N9L9 421 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 PDFQ9HBH1 243 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 NOP16Q9Y3C1 178 aaKnown RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 SOX30O94993 753 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 HNRNPA1P09651 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 TAP2Q03519 686 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 SCRN3Q0VDG4 424 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 ANKRD54Q6NXT1 300 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 SPRYD4Q8WW59 207 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-210ENST00000638567 KLK4Q9Y5K2 254 aa15.73■□□□□ 0.11
SCARB2-210ENST00000638567 KANTRA0A1W2PQU2 76 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 CST5P28325 142 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 MCCD1P59942 119 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 DEFB103AP81534 67 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 MLLT11Q13015 90 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 ZNF101Q8IZC7 436 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 SHROOM3Q8TF72 1996 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 RAD9AQ99638 391 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 DDX31Q9H8H2 851 aaKnown RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 POLMQ9NP87 494 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 MAFFQ9ULX9 164 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 SLC7A7Q9UM01 511 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 CORINQ9Y5Q5 1042 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 TEX13CA0A0J9YWL9 993 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 FMO6PO60774 539 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 RBBP9O75884 186 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 S100A6P06703 90 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 EPCAMP16422 314 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 MLLT3P42568 568 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 ALG10BQ5I7T1 473 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 LRIF1Q5T3J3 769 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 ADAMTS19Q8TE59 1207 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 RGS17Q9UGC6 210 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 ZNF639Q9UID6 485 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 FARSAQ9Y285 508 aaKnown RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 C11orf98E9PRG8 122 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 RNGTTO60942 597 aaKnown RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 LHCGRP22888 699 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 CCKBRP32239 447 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 EIF1AXP47813 144 aaKnown RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 PFN3P60673 137 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 FGFBP1Q14512 234 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 C6orf132Q5T0Z8 1188 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 LAX1Q8IWV1 398 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 INO80EQ8NBZ0 244 aaPredicted RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 TRMT10AQ8TBZ6 339 aaKnown RBP15.72■□□□□ 0.11
SCARB2-210ENST00000638567 SMARCD2Q92925 531 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 HS6ST2Q96MM7 605 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 SCN1AP35498 2009 aa15.72■□□□□ 0.11
SCARB2-210ENST00000638567 HPGDSO60760 199 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 RPS15AP62244 130 aaKnown RBP15.71■□□□□ 0.11
SCARB2-210ENST00000638567 HNRNPA1L2Q32P51 320 aaKnown RBP15.71■□□□□ 0.11
SCARB2-210ENST00000638567 ARHGAP11AQ6P4F7 1023 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 CADM3Q8N126 398 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 OR2L5Q8NG80 312 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 OR4F15Q8NGB8 312 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 ADAMTS16Q8TE57 1224 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 THAP4Q8WY91 577 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 HAVCR1Q96D42 359 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 SGTBQ96EQ0 304 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 WDR92Q96MX6 357 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 PINK1Q9BXM7 581 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 PADI2Q9Y2J8 665 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 OR2A25A4D2G3 310 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 CENPBD1B2RD01 187 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 CASC3O15234 703 aaKnown RBP15.71■□□□□ 0.11
SCARB2-210ENST00000638567 FURINP09958 794 aa15.71■□□□□ 0.11
SCARB2-210ENST00000638567 CFL1P23528 166 aaKnown RBP15.71■□□□□ 0.11
SCARB2-210ENST00000638567 CASP3P42574 277 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms