RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ELAVL4P26378 380 aaKnown RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 MSX1P28360 303 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 IL12BP29460 328 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 ZFP36L2P47974 494 aaKnown RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 ZNF844Q08AG5 666 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 VASNQ6EMK4 673 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 OR2L13Q8N349 312 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 TNIP2Q8NFZ5 429 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 ELP4Q96EB1 424 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 WDYHV1Q96HA8 205 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 C3orf30Q96M34 536 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 CCT7Q99832 543 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 SPOCK3Q9BQ16 436 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 TREX2Q9BQ50 279 aaPredicted RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 TRMOQ9BU70 441 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 ROPN1BQ9BZX4 212 aaPredicted RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 ROPN1Q9HAT0 212 aaPredicted RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 KCNJ16Q9NPI9 418 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 EQTNQ9NQ60 294 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 DDX18Q9NVP1 670 aaKnown RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 TAS2R9Q9NYW1 312 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 C19orf53Q9UNZ5 99 aaPredicted RBP16.14■□□□□ 0.17
PNKP-230ENST00000638016 CAMK2AQ9UQM7 478 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 OR10H1Q9Y4A9 318 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 TRAF6Q9Y4K3 522 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 WIF1Q9Y5W5 379 aa16.14■□□□□ 0.17
PNKP-230ENST00000638016 A0A087WV62 115 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 GXYLT2A0PJZ3 443 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 SCO2O43819 266 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 TYROBPO43914 113 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 COQ9O75208 318 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 SKAP2O75563 359 aaPredicted RBP16.13■□□□□ 0.17
PNKP-230ENST00000638016 GABRA1P14867 456 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 ETV4P43268 484 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 RFX3P48380 749 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 GAS1P54826 345 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 GAB1Q13480 694 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 RELL2Q8NC24 303 aaPredicted RBP16.13■□□□□ 0.17
PNKP-230ENST00000638016 FBXO30Q8TB52 745 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 RNF138Q8WVD3 245 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 ABTB1Q969K4 478 aaPredicted RBP16.13■□□□□ 0.17
PNKP-230ENST00000638016 TMCO6Q96DC7 493 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 LURAP1Q96LR2 239 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 PRDM14Q9GZV8 571 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 STMN4Q9H169 189 aaPredicted RBP16.13■□□□□ 0.17
PNKP-230ENST00000638016 RUBCNLQ9H714 662 aa16.13■□□□□ 0.17
PNKP-230ENST00000638016 ZNF395Q9H8N7 513 aaPredicted RBP16.13■□□□□ 0.17
PNKP-230ENST00000638016 CCDC168Q8NDH2 2452 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 NUP214P35658 2090 aaPredicted RBP16.12■□□□□ 0.17
PNKP-230ENST00000638016 PLOD2O00469 737 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 PDPK1O15530 556 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 LYPLA1O75608 230 aaPredicted RBP16.12■□□□□ 0.17
PNKP-230ENST00000638016 CHEK2O96017 543 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 BPGMP07738 259 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 NEFHP12036 1026 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 GRK2P25098 689 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 KRT20P35900 424 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 STARP49675 285 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 DLX5P56178 289 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 SNTA1Q13424 505 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 KRT71Q3SY84 523 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 RIPPLY2Q5TAB7 128 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 RNF165Q6ZSG1 346 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 GALNT10Q86SR1 603 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 PLCZ1Q86YW0 608 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 CLYBLQ8N0X4 340 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 MREGQ8N565 214 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 OR14L1PQ8NHC6 308 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 PIK3R3Q92569 461 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 PPCDCQ96CD2 204 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 OTUB1Q96FW1 271 aaPredicted RBP16.12■□□□□ 0.17
PNKP-230ENST00000638016 TRIB1Q96RU8 372 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 C1orf50Q9BV19 199 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 OR2B2Q9GZK3 357 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 REEP4Q9H6H4 257 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 SH3BP4Q9P0V3 963 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 ZDHHC2Q9UIJ5 367 aa16.12■□□□□ 0.17
PNKP-230ENST00000638016 WDR91A4D1P6 747 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 ITM2AO43736 263 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 PEX11AO75192 247 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 IGKV1D-16P01601 117 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 FGF4P08620 206 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 BCKDHAP12694 445 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 AGFG1P52594 562 aaKnown RBP16.11■□□□□ 0.17
PNKP-230ENST00000638016 TLE4Q04727 773 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 SRYQ05066 204 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 STX5Q13190 355 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 PDE7AQ13946 482 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 EFR3AQ14156 821 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 XKR7Q5GH72 579 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 NHSL2Q5HYW2 709 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 OR6Y1Q8NGX8 325 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 METTL2AQ96IZ6 378 aaKnown RBP16.11■□□□□ 0.17
PNKP-230ENST00000638016 TMEM109Q9BVC6 243 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 CBLCQ9ULV8 474 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 RPH3AQ9Y2J0 694 aaPredicted RBP16.11■□□□□ 0.17
PNKP-230ENST00000638016 WBP11Q9Y2W2 641 aaKnown RBP16.11■□□□□ 0.17
PNKP-230ENST00000638016 PCDHGB3Q9Y5G1 929 aa16.11■□□□□ 0.17
PNKP-230ENST00000638016 AHRRA9YTQ3 701 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms