RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 AK4P27144 223 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PLA2G7Q13093 441 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 KCNJ11Q14654 390 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR2T5Q6IEZ7 315 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 GFRALQ6UXV0 394 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 LINC00696Q6ZRV3 163 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CREB3L2Q70SY1 520 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF695Q8IW36 515 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR2T29Q8NH02 315 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 IFI44Q8TCB0 444 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PYURFQ96I23 114 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF583Q96ND8 569 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 MS4A4EQ96PG1 132 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PIGQQ9BRB3 760 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 UBE2ZQ9H832 354 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 POPDC3Q9HBV1 291 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PLEKHJ1Q9NW61 149 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 DNAJC27Q9NZQ0 273 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ATXN7L1Q9ULK2 861 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 POLHQ9Y253 713 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 APC2O95996 2303 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 IDSB3KWA1 339 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TSPAN12O95859 305 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PIGRP01833 764 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CRYZQ08257 329 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 FADDQ13158 208 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 AADACL4Q5VUY2 407 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TRIM73Q86UV7 250 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 KLHDC8AQ8IYD2 350 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PQLC1Q8N2U9 271 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 KLHL9Q9P2J3 617 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 C4BP0C0L5 1744 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR2T1O43869 369 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 IGHG1P01857 330 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CHRM4P08173 479 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CORO7P57737 925 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 FGL1Q08830 312 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 GPR176Q14439 515 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SYPL2Q5VXT5 272 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 KCTD11Q693B1 232 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR4F3Q6IEY1 312 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.82□□□□□ -1.482e-6■■□□□ 12
SCN1A-217ENST00000637988 MISPQ8IVT2 679 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CMTM4Q8IZR5 234 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 C12orf45Q8N5I9 185 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PLEKHO2Q8TD55 490 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 CA5BP1Q8WTZ4 195 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PEX13Q92968 403 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SEMA6CQ9H3T2 930 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TAAR2Q9P1P5 351 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ATP23Q9Y6H3 246 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR51F1A6NGY5 319 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 NOVA1P51513 510 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TUBA3CQ13748 450 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SF3A2Q15428 464 aaKnown RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SMYD5Q6GMV2 418 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF704Q6ZNC4 412 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ZNF321PQ8N8H1 164 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SFXN5Q8TD22 340 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PSMF1Q92530 271 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 DNAJA3Q96EY1 480 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 MYADMQ96S97 322 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SPIN2AQ99865 258 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 SPIN2BQ9BPZ2 258 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 KCNF1Q9H3M0 494 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 ACSS1Q9NUB1 689 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 TUBA8Q9NY65 449 aaPredicted RBP5.82□□□□□ -1.48
SCN1A-217ENST00000637988 PCTPQ9UKL6 214 aa5.82□□□□□ -1.48
SCN1A-217ENST00000637988 OR6C6A6NF89 314 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 PMM2O15305 246 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 KLK10O43240 276 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 TGFB1I1O43294 461 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 HTR3BO95264 441 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A6P0DMU7 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A5P0DMU8 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A7P0DMV0 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A8P0DMV1 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A9P0DMV2 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A2Q5DJT8 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A1Q5HYN5 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 FAM182AQ5T1J6 154 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 NANOGP8Q6NSW7 305 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 FIGNL1Q6PIW4 674 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CT45A3Q8NHU0 189 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 BRIX1Q8TDN6 353 aaKnown RBP5.81□□□□□ -1.48
SCN1A-217ENST00000637988 OR52B2Q96RD2 323 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 A0A1W2PPM1 405 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 J3QRK9 145 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 RGS11O94810 467 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 GTF2F2P13984 249 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CRHBPP24387 322 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 SPINT3P49223 89 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 STC1P52823 247 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 DCDC1P59894 354 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 RAB4BP61018 213 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 SIRPAP78324 504 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 CDK3Q00526 305 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 HMGCS1Q01581 520 aa5.81□□□□□ -1.48
SCN1A-217ENST00000637988 OR7A5Q15622 319 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 271.4 ms