RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FCRL1Q96LA6 429 aa12.61□□□□□ -0.39
PNKP-228ENST00000637325 UBQLN3Q9H347 655 aa12.61□□□□□ -0.39
PNKP-228ENST00000637325 KCNJ16Q9NPI9 418 aa12.61□□□□□ -0.39
PNKP-228ENST00000637325 MRTO4Q9UKD2 239 aaKnown RBP12.61□□□□□ -0.39
PNKP-228ENST00000637325 SLC6A5Q9Y345 797 aa12.61□□□□□ -0.39
PNKP-228ENST00000637325 AHRRA9YTQ3 701 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 UPK1AO00322 258 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 PEX11AO75192 247 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 SKAP2O75563 359 aaPredicted RBP12.6□□□□□ -0.39
PNKP-228ENST00000637325 CBR3O75828 277 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 HSPA4LO95757 839 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 BCKDHAP12694 445 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 HPCAL1P37235 193 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 PTGDSP41222 190 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 SERPINB4P48594 390 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 PNLIPRP2P54317 469 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 SF3B4Q15427 424 aaKnown RBP eCLIP12.6□□□□□ -0.397e-7■■□□□ 14.1
PNKP-228ENST00000637325 DECR1Q16698 335 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 CYP27C1Q4G0S4 372 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 WIPI1Q5MNZ9 446 aaPredicted RBP12.6□□□□□ -0.39
PNKP-228ENST00000637325 RTL6Q6ICC9 239 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 SZRD1Q7Z422 152 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 R3HCC1LQ7Z5L2 792 aaKnown RBP12.6□□□□□ -0.39
PNKP-228ENST00000637325 CROCCP2Q86T23 111 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 PM20D2Q8IYS1 436 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 ULK2Q8IYT8 1036 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 OR2L13Q8N349 312 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 FAM83FQ8NEG4 500 aaPredicted RBP12.6□□□□□ -0.39
PNKP-228ENST00000637325 OR4N2Q8NGD1 307 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 ZBTB9Q96C00 473 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 ZBED6CLQ96FA7 236 aaPredicted RBP12.6□□□□□ -0.39
PNKP-228ENST00000637325 PKNOX2Q96KN3 472 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 UCK2Q9BZX2 261 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 C3orf14Q9HBI5 128 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 Q9N2J8 555 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 KCNK9Q9NPC2 374 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 SERHLQ9NQF3 203 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 ZDHHC2Q9UIJ5 367 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 CBLCQ9ULV8 474 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 CAMK2AQ9UQM7 478 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 FAM215AQ9Y5M1 114 aa12.6□□□□□ -0.39
PNKP-228ENST00000637325 NKX2-6A6NCS4 301 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 TTC36A6NLP5 189 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 TM9SF1O15321 606 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 TBX19O60806 448 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 PRPS2P11908 318 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 PRF1P14222 555 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 GABRA3P34903 492 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 RPL3P39023 403 aaKnown RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 ETV4P43268 484 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 KIR3DL1P43629 444 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 ZFP36L2P47974 494 aaKnown RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 RFX3P48380 749 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 PRKAG1P54619 331 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 PSG6Q00889 435 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 CRYZQ08257 329 aaKnown RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 GAB1Q13480 694 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 LRIG3Q6UXM1 1119 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 GDF7Q7Z4P5 450 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 WDR53Q7Z5U6 358 aaPredicted RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 EXOC3L1Q86VI1 746 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 PLCZ1Q86YW0 608 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 FNDC5Q8NAU1 212 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 OR14L1PQ8NHC6 308 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 CEP70Q8NHQ1 597 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 ABTB1Q969K4 478 aaPredicted RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 TUBGCP3Q96CW5 907 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 NTNG2Q96CW9 530 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 MTERF3Q96E29 417 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 ZNF764Q96H86 408 aaPredicted RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 ZIM3Q96PE6 472 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 TIMP4Q99727 224 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 SSU72Q9NP77 194 aaKnown RBP12.59□□□□□ -0.39
PNKP-228ENST00000637325 EQTNQ9NQ60 294 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 GIMAP2Q9UG22 337 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 DKKL1Q9UK85 242 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 WIF1Q9Y5W5 379 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 KIAA1549Q9HCM3 1950 aa12.59□□□□□ -0.39
PNKP-228ENST00000637325 A0A0G2JNJ9 132 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 BIRC5O15392 142 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 SCO2O43819 266 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 SERPINE1P05121 402 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 IFI6P09912 130 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 CYP4B1P13584 511 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 BMP7P18075 431 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 ARRB2P32121 409 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 EVI2BP34910 448 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 CLK3P49761 638 aaKnown RBP12.58□□□□□ -0.4
PNKP-228ENST00000637325 PSMD4P55036 377 aaKnown RBP12.58□□□□□ -0.4
PNKP-228ENST00000637325 CHI3L2Q15782 390 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 ZNF385BQ569K4 471 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 XKR7Q5GH72 579 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 RIPPLY2Q5TAB7 128 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 OR5M10Q6IEU7 315 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 WDSUB1Q8N9V3 476 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 NUP43Q8NFH3 380 aa12.58□□□□□ -0.4
PNKP-228ENST00000637325 OR4K17Q8NGC6 315 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms