RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 OR2M5A3KFT3 312 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 DPRXA6NFQ7 191 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 H3BML4 177 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 REM1O75628 298 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 PLGP00747 810 aaPredicted RBP16.18■□□□□ 0.18
CLN6-212ENST00000636020 ITGA2P17301 1181 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 HK1P19367 917 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 PTNP21246 168 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 USF1P22415 310 aaPredicted RBP16.18■□□□□ 0.18
CLN6-212ENST00000636020 PIK3CBP42338 1070 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 BSPH1Q075Z2 132 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 MAP4K2Q12851 820 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 TAB1Q15750 504 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 PRICKLE4Q2TBC4 344 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 SEZ6L2Q6UXD5 910 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 IGDCC3Q8IVU1 814 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 FADS6Q8N9I5 356 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 C10orf105Q8TEF2 133 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 FAM168AQ92567 244 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 ZMYND19Q96E35 227 aaPredicted RBP16.18■□□□□ 0.18
CLN6-212ENST00000636020 MTERF1Q99551 399 aaKnown RBP16.18■□□□□ 0.18
CLN6-212ENST00000636020 CACNG6Q9BXT2 260 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 DERL2Q9GZP9 239 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 DSN1Q9H410 356 aa16.18■□□□□ 0.18
CLN6-212ENST00000636020 LOC100289279A0A1B0GTE1 492 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 FAM95CA0A1B0GW59 222 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 RAMP1O60894 148 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PYGBP11216 843 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PORP16435 677 aaPredicted RBP16.17■□□□□ 0.18
CLN6-212ENST00000636020 PTX3P26022 381 aaPredicted RBP16.17■□□□□ 0.18
CLN6-212ENST00000636020 SGCBQ16585 318 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 MSS51Q4VC12 460 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 AGAP6Q5VW22 663 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 TRMT10BQ6PF06 316 aaKnown RBP16.17■□□□□ 0.18
CLN6-212ENST00000636020 FIGNL1Q6PIW4 674 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 LRRC70Q7Z2Q7 622 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 STK32CQ86UX6 486 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 ZC3HC1Q86WB0 502 aaKnown RBP16.17■□□□□ 0.18
CLN6-212ENST00000636020 PDPRQ8NCN5 879 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 OR2M3Q8NG83 312 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 OR5M1Q8NGP8 315 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PIWIL2Q8TC59 973 aaKnown RBP16.17■□□□□ 0.18
CLN6-212ENST00000636020 HSD17B8Q92506 261 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 ADOQ96SZ5 270 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 NAT9Q9BTE0 207 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 LRRC1Q9BTT6 524 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PRRG4Q9BZD6 226 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 CD244Q9BZW8 370 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 TRIM5Q9C035 493 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 C12orf65Q9H3J6 166 aaKnown RBP16.17■□□□□ 0.18
CLN6-212ENST00000636020 EML4Q9HC35 981 aaKnown RBP16.17■□□□□ 0.18
CLN6-212ENST00000636020 MAT2BQ9NZL9 334 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PLLPQ9Y342 182 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PSAT1Q9Y617 370 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PCNX3Q9H6A9 2034 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 PLCE1Q9P212 2302 aa16.17■□□□□ 0.18
CLN6-212ENST00000636020 SHISA9B4DS77 424 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 TSPAN2O60636 221 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 GCM2O75603 506 aaPredicted RBP16.16■□□□□ 0.18
CLN6-212ENST00000636020 CBX7O95931 251 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 C21orf58P58505 322 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 SLMAPQ14BN4 828 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 TSC22D1Q15714 1073 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 PDLIM3Q53GG5 364 aaPredicted RBP16.16■□□□□ 0.18
CLN6-212ENST00000636020 C11orf71Q6IPW1 123 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 GRHL2Q6ISB3 625 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 PPIL6Q8IXY8 311 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 ZNF619Q8N2I2 560 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 SPATA6LQ8N4H0 392 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 MSI2Q96DH6 328 aaKnown RBP16.16■□□□□ 0.18
CLN6-212ENST00000636020 BRINP2Q9C0B6 783 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 FOLH1BQ9HBA9 442 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 CD274Q9NZQ7 290 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 ASIC3Q9UHC3 531 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 GPR55Q9Y2T6 319 aaPredicted RBP16.16■□□□□ 0.18
CLN6-212ENST00000636020 TSC22D4Q9Y3Q8 395 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 AP4B1Q9Y6B7 739 aa16.16■□□□□ 0.18
CLN6-212ENST00000636020 TRRAPQ9Y4A5 3859 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 GBAP04062 536 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 EMDP50402 254 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 EFR3AQ14156 821 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 OR4D1Q15615 310 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 PPP4R4Q6NUP7 873 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 GGNQ86UU5 652 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 GABRG1Q8N1C3 465 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 HTRA1Q92743 480 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 HBEGFQ99075 208 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 POPDC3Q9HBV1 291 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 SMYD2Q9NRG4 433 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 FBXO34Q9NWN3 711 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 PPP4R1LQ9P1A2 415 aa16.15■□□□□ 0.18
CLN6-212ENST00000636020 KIAA0513O60268 411 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 WISP3O95389 354 aaPredicted RBP16.14■□□□□ 0.17
CLN6-212ENST00000636020 CDH11P55287 796 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 CUL3Q13618 768 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 GANABQ14697 944 aaKnown RBP16.14■□□□□ 0.17
CLN6-212ENST00000636020 RAB35Q15286 201 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 SFRP5Q5T4F7 317 aa16.14■□□□□ 0.17
CLN6-212ENST00000636020 RNASEH2BQ5TBB1 312 aaKnown RBP16.14■□□□□ 0.17
CLN6-212ENST00000636020 MFSD12Q6NUT3 480 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms