RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 DIP2CQ9Y2E4 1556 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PDE4DIPQ5VU43 2346 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SULT1B1O43704 296 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ANGPTL7O43827 346 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SLITRK5O94991 958 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FABP1P07148 127 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GSTP1P09211 210 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ANXA7P20073 488 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RPL13AP40429 203 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CSNK1A1P48729 337 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF33BQ06732 778 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FADDQ13158 208 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FAM74A1Q5RGS3 127 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FAM43BQ6ZT52 329 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ASCC1Q8N9N2 400 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 HAVCR2Q8TDQ0 301 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RNF170Q96K19 258 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF75AQ96N20 296 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SLC25A31Q9H0C2 315 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 APMAPQ9HDC9 416 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ACSL6Q9UKU0 697 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RNF11Q9Y3C5 154 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TARBP1Q13395 1621 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 A0A0U1RQF3 1178 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 A0A1W2PQ09 198 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 UNCXA6NJT0 531 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CNIH1O95406 144 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 C1GALT1C1LP0DN25 315 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RAB3AP20336 220 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FPR1P21462 350 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BDKRB2P30411 391 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CXCL12P48061 93 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ADARB1P78563 741 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 IRF9Q00978 393 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RHDQ02161 417 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SCAPQ12770 1279 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SLC10A6Q3KNW5 377 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 RNASE10Q5GAN6 216 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 C9orf152Q5JTZ5 239 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 KANK2Q63ZY3 851 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 MFSD5Q6N075 450 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 IL20RBQ6UXL0 311 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 MKXQ8IYA7 352 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PACRGLQ8N7B6 248 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CREB3L4Q8TEY5 395 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ASB9Q96DX5 294 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TRMT2BQ96GJ1 504 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SLC41A3Q96GZ6 507 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZPBPQ9BS86 351 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GATA5Q9BWX5 397 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ARHGAP39Q9C0H5 1083 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 LMAN1LQ9HAT1 526 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM248Q9NWD8 314 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 DTLQ9NZJ0 730 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 NME7Q9Y5B8 376 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PIAS3Q9Y6X2 628 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM265A0A087WTH1 108 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TTC24A2A3L6 582 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 MAOAP21397 527 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 IL2RGP31785 369 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TNFRSF4P43489 277 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 EMX2Q04743 252 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CDHR3Q6ZTQ4 885 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 LARP4Q71RC2 724 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 IL1F10Q8WWZ1 152 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF689Q96CS4 500 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ST6GALNAC5Q9BVH7 336 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 NKX2-4Q9H2Z4 354 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 AGPAT4Q9NRZ5 378 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 FETUBQ9UGM5 382 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 OAZ3Q9UMX2 235 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 SRPK3Q9UPE1 567 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF541Q9H0D2 1346 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 C17orf112F2Z3M2 114 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 EEF1E1O43324 174 aaKnown RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 B4GAT1O43505 415 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GPR137BO60478 399 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CD48P09326 243 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CHRNB2P17787 502 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PPP5CP53041 499 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 NUDT6P53370 316 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 EMP2P54851 167 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TAS2R30P59541 319 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 CTXN1P60606 82 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF674Q2M3X9 581 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ZADH2Q8N4Q0 377 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TEX19Q8NA77 164 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 OR51A7Q8NH64 312 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 NANPQ8TBE9 248 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 ALG3Q92685 438 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BADQ92934 168 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 DHRS9Q9BPW9 319 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM59Q9BXS4 323 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GPN2Q9H9Y4 310 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 NLE1Q9NVX2 485 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-209ENST00000635750 GJD2Q9UKL4 321 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 LRRC42Q9Y546 428 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 BCL9O00512 1426 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 F6UZH7 168 aa5.28□□□□□ -1.56
SCN1A-209ENST00000635750 PRAMEF26H0Y7S4 382 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms