RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 YTHDF1Q9BYJ9 559 aaKnown RBP13.42□□□□□ -0.26
LINC00339-208ENST00000634934 SLC25A37Q9NYZ2 338 aa13.42□□□□□ -0.26
LINC00339-208ENST00000634934 VAPAQ9P0L0 249 aa13.42□□□□□ -0.26
LINC00339-208ENST00000634934 NUP214P35658 2090 aaPredicted RBP13.41□□□□□ -0.26
LINC00339-208ENST00000634934 H3BNH8 94 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 EFSO43281 561 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 PRAMEF2O60811 474 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 COQ9O75208 318 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 C1QCP02747 245 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 CLPSP04118 112 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 IGKV3-11P04433 115 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 IFI6P09912 130 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 CASP9P55211 416 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 DUSP8Q13202 625 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 NADK2Q4G0N4 442 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 NHSL2Q5HYW2 709 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 TNIP2Q8NFZ5 429 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 ZFP90Q8TF47 636 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 VMP1Q96GC9 406 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 MS4A4EQ96PG1 132 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 TPT1P8Q9HAU6 139 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 CPNE5Q9HCH3 593 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 ETAA1Q9NY74 926 aa13.41□□□□□ -0.26
LINC00339-208ENST00000634934 TRBV11-1A0A0K0K1C0 115 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 C7orf72A4D263 438 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 FXYD1O00168 92 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 CLIC1O00299 241 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 KRT75O95678 551 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 HMGN2P05204 90 aaKnown RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 CELA2AP08217 269 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 HOXB9P17482 250 aaPredicted RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 HOXB6P17509 224 aaKnown RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 TTKP33981 857 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 GPR143P51810 404 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 SLC37A1P57057 533 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 EEFSECP57772 596 aaKnown RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 RPS26P62854 115 aaKnown RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 CDC20Q12834 499 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 ZNF155Q12901 538 aaPredicted RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 LASP1Q14847 261 aaKnown RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 BROXQ5VW32 411 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 SAXO2Q658L1 398 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 PLAG1Q6DJT9 500 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 HSDL2Q6YN16 418 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 CCDC81Q6ZN84 652 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 RNF130Q86XS8 419 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 METTL25Q8N6Q8 603 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 ZNF615Q8N8J6 731 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 APCDD1LQ8NCL9 501 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 C16orf52Q8NHV5 167 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 FBXO30Q8TB52 745 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 M1APQ8TC57 530 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 THAP4Q8WY91 577 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 TFAP2CQ92754 450 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 NEURL3Q96EH8 262 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 C16orf58Q96GQ5 468 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 SLC35G5Q96KT7 338 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 FER1L6-AS2Q96M78 137 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 YIPF4Q9BSR8 244 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 THUMPD3Q9BV44 507 aaKnown RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 TRIM8Q9BZR9 551 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 COQ10BQ9H8M1 238 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 AGPAT4Q9NRZ5 378 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 NTMQ9P121 344 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 PRODH2Q9UF12 536 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 FAF1Q9UNN5 650 aaPredicted RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 PPIEQ9UNP9 301 aaKnown RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 MYRFQ9Y2G1 1151 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 HEMK1Q9Y5R4 338 aaPredicted RBP13.4□□□□□ -0.26
LINC00339-208ENST00000634934 MGAQ8IWI9 3026 aa13.4□□□□□ -0.26
LINC00339-208ENST00000634934 TRBV5-3A0A0A0MS03 114 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ARGFXA6NJG6 315 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ICAM2P13598 275 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 MYF6P23409 242 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 EMDP50402 254 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SLC7A2P52569 658 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 MTPNP58546 118 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 RUNDC3AQ59EK9 446 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 DCAF10Q5QP82 559 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 HLA-DQA1Q5Y7H0 255 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 DHRS4L2Q6PKH6 230 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SLC29A4Q7RTT9 530 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 WDR53Q7Z5U6 358 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 TSPAN14Q8NG11 270 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 OTUB1Q96FW1 271 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 CENPNQ96H22 339 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 GAL3ST4Q96RP7 486 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 C9orf16Q9BUW7 83 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 DEFB126Q9BYW3 111 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SEMA4CQ9C0C4 833 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 EPS8L2Q9H6S3 715 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 FOLH1BQ9HBA9 442 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 GPATCH2Q9NW75 528 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 ZNF223Q9UK11 482 aaPredicted RBP13.39□□□□□ -0.27
LINC00339-208ENST00000634934 POLHQ9Y253 713 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 CFL2Q9Y281 166 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 DTX4Q9Y2E6 619 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
LINC00339-208ENST00000634934 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms