RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 FBXL21Q9UKT6 434 aa6.72□□□□□ -1.33
BRCA1-230ENST00000634433 SLC9A8Q9Y2E8 581 aa6.72□□□□□ -1.33
BRCA1-230ENST00000634433 SNX11Q9Y5W9 270 aa6.72□□□□□ -1.33
BRCA1-230ENST00000634433 GPC6Q9Y625 555 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-230ENST00000634433 IGHV1OR15-9A0A0B4J2B8 117 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 A0A0U1RQK1 487 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF320A2RRD8 509 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ENO4A6NNW6 628 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 C4orf51C9J302 202 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SLC1A7O00341 560 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 AXIN1O15169 862 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SLC25A17O43808 307 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 B4GALT2O60909 372 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TSC22D2O75157 780 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CPNE6O95741 557 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 JUNDP17535 347 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ALOX12P18054 663 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 POU3F2P20265 443 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CD27P26842 260 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 FEN1P39748 380 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 YAP1P46937 504 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 DHPSP49366 369 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ZXDAP98168 799 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TEKQ02763 1124 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 LAPTM4AQ15012 233 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 DUSP7Q16829 419 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 EXOC3L2Q2M3D2 409 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CTU2Q2VPK5 515 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 RNF44Q7L0R7 432 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TSEN54Q7Z6J9 526 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF605Q86T29 641 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 GKN2Q86XP6 184 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 LRRC25Q8N386 305 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 AGBL5Q8NDL9 886 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 FAM46DQ8NEK8 389 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 BPIFB6Q8NFQ5 453 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CADM4Q8NFZ8 388 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SUN3Q8TAQ9 357 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SLC37A2Q8TED4 501 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 UCN3Q969E3 161 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ELP4Q96EB1 424 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CNRIP1Q96F85 164 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 HRASLS5Q96KN8 279 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF681Q96N22 645 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 COL21A1Q96P44 957 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 NODALQ96S42 347 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TREX2Q9BQ50 279 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 RPRD1BQ9NQG5 326 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ACER3Q9NUN7 267 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 KCND3Q9UK17 655 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 OR5K3A6NET4 321 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 E9PQ18 207 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 H0YGG7 62 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CASC3O15234 703 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CTSVO60911 334 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TRMUO75648 421 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 HMGN2P05204 90 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 IFI6P09912 130 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 IL7RP16871 459 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TNFRSF1BP20333 461 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 POLR2IP36954 125 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 NBL1P41271 181 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 LIMS1P48059 325 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 XKP51811 444 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ARF3P61204 181 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SKP1P63208 163 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 HHEXQ03014 270 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 PMS2P3Q13401 168 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 RAB39AQ14964 217 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SYPL1Q16563 259 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 PROX2Q3B8N5 592 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 NIPAL1Q6NVV3 410 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TRAT1Q6PIZ9 186 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TMEM107Q6UX40 140 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 MOGAT3Q86VF5 341 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SPARTQ8N0X7 666 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF687Q8N1G0 1237 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 PARP8Q8N3A8 854 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SVOPQ8N4V2 548 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SLC5A8Q8N695 610 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 OR52J3Q8NH60 311 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 TRNT1Q96Q11 434 aaKnown RBP6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CCDC3Q9BQI4 270 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CNPPD1Q9BV87 410 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 PINK1Q9BXM7 581 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 ACTRT3Q9BYD9 372 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CHRDQ9H2X0 955 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SEMA6CQ9H3T2 930 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 UCK1Q9HA47 277 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 KCMF1Q9P0J7 381 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 NTMQ9P121 344 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 PTGFRNQ9P2B2 879 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 SLC13A4Q9UKG4 626 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 CA14Q9ULX7 337 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 DAPP1Q9UN19 280 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 MGAT4BQ9UQ53 548 aa6.71□□□□□ -1.34
BRCA1-230ENST00000634433 REV3LO60673 3130 aa6.7□□□□□ -1.34
BRCA1-230ENST00000634433 GOLGA4Q13439 2230 aaKnown RBP6.7□□□□□ -1.34
BRCA1-230ENST00000634433 METTL12A8MUP2 240 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms