RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 LRR1Q96L50 414 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 CHRDQ9H2X0 955 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 FZD8Q9H461 694 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 SLA2Q9H6Q3 261 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 TMEM248Q9NWD8 314 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 SIDT1Q9NXL6 827 aaKnown RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 NOCTQ9UK39 431 aaKnown RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 HEMK1Q9Y5R4 338 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 ATRNL1Q5VV63 1379 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 CD8B2A6NJW9 211 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 GLOD5A6NK44 160 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 B4DXG7 233 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 ITM2AO43736 263 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 PRAMEF11O60813 436 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 AHSGP02765 367 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 CD8BP10966 210 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 ZNF28P17035 718 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 SERPINF1P36955 418 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 MC3RP41968 323 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 NR4A2P43354 598 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 EFNA3P52797 238 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 OGDHQ02218 1023 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 PAFAH1B3Q15102 231 aaKnown RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 RAB35Q15286 201 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 SUSD1Q6UWL2 747 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 LARP4Q71RC2 724 aaKnown RBP eCLIP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 CMASQ8NFW8 434 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 GPR148Q8TDV2 347 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 CHTF18Q8WVB6 975 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 TRUB1Q8WWH5 349 aaKnown RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 MTHFD2LQ9H903 347 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 FN3KRPQ9HA64 309 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 OR6C74A6NCV1 312 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 RASAL1O95294 804 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 IGHEP01854 428 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 RETP07949 1114 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 AKAIN1P0CW23 69 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 CKMT1AP12532 417 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 SMPD1P17405 629 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 PBX1P40424 430 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 HTR2BP41595 481 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 RPL35P42766 123 aaKnown RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 OR1E2P47887 323 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 PCBD1P61457 104 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 PPP1R8Q12972 351 aaKnown RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 PTPRCAPQ14761 206 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 PCGF3Q3KNV8 242 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 HACD4Q5VWC8 232 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 CCBE1Q6UXH8 406 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 RBMS3Q6XE24 437 aaKnown RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 OR11L1Q8NGX0 322 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 ITPKCQ96DU7 683 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 COQ10AQ96MF6 247 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 GPN2Q9H9Y4 310 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 SPATA6Q9NWH7 488 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-216ENST00000628124 FTSJ1Q9UET6 329 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 ACAD8Q9UKU7 415 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 Q9Y3F1 56 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 HS3ST4Q9Y661 456 aa8.5□□□□□ -1.05
GABRB3-216ENST00000628124 ZNF736B4DX44 427 aaPredicted RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 E9PI62 339 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 J3QR89 54 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 K7EQM0 130 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 MRPS14O60783 128 aaKnown RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 NDUFB2O95178 105 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 DCNP07585 359 aaKnown RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 SLC2A1P11166 492 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 GGT1P19440 569 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 KDELR2P33947 212 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 GDF5P43026 501 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 PAN3Q58A45 887 aaKnown RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 TXNDC8Q6A555 127 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 NOXA1Q86UR1 476 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 CMTM8Q8IZV2 173 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 SFXN2Q96NB2 322 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 PLAGL1Q9UM63 463 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 OARD1Q9Y530 152 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 WNT6Q9Y6F9 365 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 A0A0U1RQJ8 604 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 SULT1B1O43704 296 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 GBAP04062 536 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 ETV5P41161 510 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 NPBWR1P48145 328 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 CTXN1P60606 82 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 GALNT2Q10471 571 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 EIF4HQ15056 248 aaKnown RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 TMEM244Q5VVB8 128 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 TMEM236Q5W0B7 351 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 SFRP4Q6FHJ7 346 aaPredicted RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 LCTLQ6UWM7 567 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 SYT14Q8NB59 555 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 C2CD4AQ8NCU7 369 aaPredicted RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 STEAP2Q8NFT2 490 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 OR5D16Q8NGK9 328 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 PXYLP1Q8TE99 480 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 OR1E3Q8WZA6 343 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 KAZALD1Q96I82 304 aa8.49□□□□□ -1.05
GABRB3-216ENST00000628124 RBM24Q9BX46 236 aaKnown RBP8.49□□□□□ -1.05
GABRB3-216ENST00000628124 GFOD1Q9NXC2 390 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms