RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CASP3P42574 277 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 MAGEA8P43361 318 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 UQCRFS1P47985 274 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 DNASE1L1P49184 302 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 CCT3P49368 545 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 ST13P50502 369 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 CDK9P50750 372 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 CORO7P57737 925 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 FOXO1Q12778 655 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 SLC10A1Q14973 349 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 PRSS53Q2L4Q9 553 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 PRAMEF20Q5VT98 475 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 MFSD12Q6NUT3 480 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 EPGNQ6UW88 154 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 CLEC18BQ6UXF7 455 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 PRR22Q8IZ63 422 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 CLEC18CQ8NCF0 446 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 SIMC1Q8NDZ2 872 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 OR5M3Q8NGP4 307 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 GPR151Q8TDV0 419 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 HGDQ93099 445 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 FAM120BQ96EK7 910 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 ACTRT3Q9BYD9 372 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 WDR55Q9H6Y2 383 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 ACKR4Q9NPB9 350 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 SDR39U1Q9NRG7 319 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 TUBA8Q9NY65 449 aaPredicted RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 SUCOQ9UBS9 1254 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 GPR45Q9Y5Y3 372 aa12.85□□□□□ -0.35
SNRPA1-216ENST00000626000 GOLGA8QA0A0J9YX86 632 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 GOLGA8OA6NCC3 632 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 GOLGA8NF8WBI6 632 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 BCKDKO14874 412 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 UGT2B11O75310 529 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 TRIM3O75382 744 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 IL33O95760 270 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 C6orf47O95873 294 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 AK1P00568 194 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 GABRA3P34903 492 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 PRKAG1P54619 331 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 UBAP2LQ14157 1087 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 EIF2S3LQ2VIR3 472 aaKnown RBP12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 CMPK2Q5EBM0 449 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 TIGD3Q6B0B8 471 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 CDC73Q6P1J9 531 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 NPSR1Q6W5P4 371 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 Q6ZPB1 254 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 ZGRF1Q86YA3 2104 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 SPPL2CQ8IUH8 684 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 MIER2Q8N344 545 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 COX18Q8N8Q8 333 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 RELTQ969Z4 430 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 PIGUQ9H490 435 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 RABEP2Q9H5N1 569 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 ZNF703Q9H7S9 590 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 RMND5AQ9H871 391 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 ANKRA2Q9H9E1 313 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 EQTNQ9NQ60 294 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 SIRT3Q9NTG7 399 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 BTNL2Q9UIR0 455 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 TRIM33Q9UPN9 1127 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 OSGIN2Q9Y236 505 aa12.84□□□□□ -0.35
SNRPA1-216ENST00000626000 ASH1LQ9NR48 2969 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 PYCARD-AS1I3L0S3 204 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 AQP7O14520 342 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 ZNF195O14628 629 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 SLC22A3O75751 556 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 PGRP06401 933 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 NGFRP08138 427 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 ALDOCP09972 364 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 ENDOUP21128 410 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 PTGS2P35354 604 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 SOAT1P35610 550 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 MAP3K8P41279 467 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 CA7P43166 264 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 HBA1P69905 142 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 SF3B4Q15427 424 aaKnown RBP eCLIP12.83□□□□□ -0.363e-9■■■■□ 24.3
SNRPA1-216ENST00000626000 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 FAM174BQ3ZCQ3 159 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 RNFT1Q5M7Z0 435 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 OR4F3Q6IEY1 312 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 TMEM251Q8N6I4 163 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 OR4A15Q8NGL6 344 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 OR1J4Q8NGS1 313 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 ADAMTS15Q8TE58 950 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 OIT3Q8WWZ8 545 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 SLC9A6Q92581 669 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 JADE3Q92613 823 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 SARAFQ96BY9 339 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 JSRP1Q96MG2 331 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 BTBD2Q9BX70 525 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 LDAHQ9H6V9 325 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 SLCO1B3Q9NPD5 702 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 ZNF835Q9Y2P0 537 aa12.83□□□□□ -0.36
SNRPA1-216ENST00000626000 C15orf41Q9Y2V0 281 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms