RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 OR56A1Q8NGH5 318 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 OR9A2Q8NGT5 310 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 ARHGAP9Q9BRR9 750 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 MED18Q9BUE0 208 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 SYNPO2LQ9H987 977 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 SLC6A20Q9NP91 592 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 GSTK1Q9Y2Q3 226 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 CHST2Q9Y4C5 530 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 IRGMA1A4Y4 181 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 HMX3A6NHT5 357 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 KDM4EB2RXH2 506 aaPredicted RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 CASKO14936 926 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 SCAMP1O15126 338 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 ALPPP05187 535 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 PTNP21246 168 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 IFNGR2P38484 337 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 RPS5P46782 204 aaKnown RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 DUSP6Q16828 381 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 ZNF628Q5EBL2 1059 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 SLC35F1Q5T1Q4 408 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 MRM1Q6IN84 353 aaKnown RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 RASSF6Q6ZTQ3 369 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 FBXL6Q8N531 539 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 DIO2Q92813 273 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 SNX18Q96RF0 628 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 TTYH2Q9BSA4 534 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 TMED9Q9BVK6 235 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 TEX101Q9BY14 249 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 POLMQ9NP87 494 aaPredicted RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 IL23AQ9NPF7 189 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 MALT1Q9UDY8 824 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 IL20RAQ9UHF4 553 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 CES1P1Q9UKY3 287 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 CLCA2Q9UQC9 943 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 B4DXG7 233 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 PLA2G10O15496 165 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 CCNYL3P0C7X3 344 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 CSNK2A2P19784 350 aaPredicted RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 APEX1P27695 318 aaKnown RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 SLC1A3P43003 542 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 OMPP47874 163 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 PRR5P85299 388 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 TGM3Q08188 693 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 IRF4Q15306 451 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.56□□□□□ -0.72
VARS2-213ENST00000625423 SLC48A1Q6P1K1 146 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 OR52E1Q8NGJ3 308 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 OR4Q3Q8NH05 313 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 SMG7Q92540 1137 aaKnown RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 KAT2AQ92830 837 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 ARHGDIGQ99819 225 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 YIPF2Q9BWQ6 316 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 HDHD5Q9BXW7 423 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 TBC1D17Q9HA65 648 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 ISYNA1Q9NPH2 558 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 SERGEFQ9UGK8 458 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 NUFIP1Q9UHK0 495 aaKnown RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 MOSPD1Q9UJG1 213 aa10.56□□□□□ -0.72
VARS2-213ENST00000625423 NDRG2Q9UN36 371 aaKnown RBP10.56□□□□□ -0.72
VARS2-213ENST00000625423 FAM172BPA6NC97 362 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 EMC8O43402 210 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 NCR1O76036 304 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 F3P13726 295 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 PKLRP30613 574 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 TRIM23P36406 574 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 GPR4P46093 362 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 RACK1P63244 317 aaKnown RBP10.55□□□□□ -0.72
VARS2-213ENST00000625423 ST3GAL3Q11203 375 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 INSL4Q14641 139 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 LTB4RQ15722 352 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 AGBL4Q5VU57 503 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 RDH10Q8IZV5 341 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 VWA5B2Q8N398 1253 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 TMEM145Q8NBT3 493 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 ZNF485Q8NCK3 441 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 OR2L8Q8NGY9 312 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 PIGXQ8TBF5 258 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 JPH3Q8WXH2 748 aaPredicted RBP10.55□□□□□ -0.72
VARS2-213ENST00000625423 AP3S1Q92572 193 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 BEX2Q9BXY8 128 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 PRR23AA6NEV1 266 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 SYT5O00445 386 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 FCMRO60667 390 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 MPIP34949 423 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 KIR2DL3P43628 341 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 TRIM48Q8IWZ4 208 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 BBS1Q8NFJ9 593 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 OR2L5Q8NG80 312 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 ELP4Q96EB1 424 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 C6orf106Q9H6K1 298 aaPredicted RBP10.55□□□□□ -0.72
VARS2-213ENST00000625423 RANGRFQ9HD47 186 aaPredicted RBP10.55□□□□□ -0.72
VARS2-213ENST00000625423 SPHK1Q9NYA1 384 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 LIPT1Q9Y234 373 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 TRPM6Q9BX84 2022 aa10.55□□□□□ -0.72
VARS2-213ENST00000625423 A0A0B4J293 547 aa10.54□□□□□ -0.72
VARS2-213ENST00000625423 SEC14L5O43304 696 aa10.54□□□□□ -0.72
VARS2-213ENST00000625423 HPGDSO60760 199 aa10.54□□□□□ -0.72
VARS2-213ENST00000625423 GUCY1B2O75343 617 aa10.54□□□□□ -0.72
VARS2-213ENST00000625423 ZIC2O95409 532 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms