RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CRATP43155 626 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 OR1E2P47887 323 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 ATP12AP54707 1039 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 SSX2Q16385 188 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 GRHL2Q6ISB3 625 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 NLRC3Q7RTR2 1065 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 SLC43A2Q8N370 569 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 LMNTD1Q8N9Z9 388 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 PHOSPHO1Q8TCT1 267 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 FCGR1BQ92637 280 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 LRRC46Q96FV0 321 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 PKP4Q99569 1192 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 BARHL1Q9BZE3 327 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 ZNF436Q9C0F3 470 aaPredicted RBP11.75□□□□□ -0.53
LITAF-221ENST00000622633 CRLF2Q9HC73 371 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 RBFOX1Q9NWB1 397 aaKnown RBP11.75□□□□□ -0.53
LITAF-221ENST00000622633 BTNL2Q9UIR0 455 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 SLC6A5Q9Y345 797 aa11.75□□□□□ -0.53
LITAF-221ENST00000622633 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 H0YIV9 168 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 AIPO00170 330 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 GRM6O15303 877 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 SLC16A8O95907 504 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 SPP1P10451 314 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PRG2P13727 222 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 ETFAP13804 333 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 MUC1P15941 1255 aaPredicted RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 PCGF2P35227 344 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 NUDT6P53370 316 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 CTSCP53634 463 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 RPS13P62277 151 aaKnown RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 TP53BP2Q13625 1128 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 MICBQ29980 383 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 POM121L1PQ3SYA9 428 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 SYTL3Q4VX76 610 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 ZNF385BQ569K4 471 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 FRMPD2BQ6IN97 320 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 C3orf33Q6P1S2 294 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 ZER1Q7Z7L7 766 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 RNF130Q86XS8 419 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 C11orf65Q8NCR3 313 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 DMBX1Q8NFW5 382 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 CHTF18Q8WVB6 975 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 BTN2A2Q8WVV5 523 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 COQ10AQ96MF6 247 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PFDN5Q99471 154 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 SPSB2Q99619 263 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 SLC46A2Q9BY10 475 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 GABARAPL3Q9BY60 117 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 DNTTIP1Q9H147 329 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 HCN3Q9P1Z3 774 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PSORS1C1Q9UIG5 152 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 EXO1Q9UQ84 846 aaKnown RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 CCL26Q9Y258 94 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PDE4DIPQ5VU43 2346 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 CXCL10P02778 98 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 NMBP08949 121 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 RD3LP0DJH9 198 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 LAP3P28838 519 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PBLDP30039 288 aaPredicted RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 GGT2P36268 569 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 XKP51811 444 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 POLR2LP62875 67 aaKnown RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 SELENOWP63302 87 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 RPP30P78346 268 aaKnown RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 DEFA6Q01524 100 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PPIGQ13427 754 aaKnown RBP eCLIP11.74□□□□□ -0.53
LITAF-221ENST00000622633 TSTA3Q13630 321 aaPredicted RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 PPA1Q15181 289 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 ACER2Q5QJU3 275 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 ANXA8L1Q5VT79 327 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 FAM131AQ6UXB0 335 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 KANSL1Q7Z3B3 1105 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 TRMT11Q7Z4G4 463 aaKnown RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 ZNF655Q8N720 491 aaPredicted RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 OR2A12Q8NGT7 310 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 NR4A3Q92570 626 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 GGHQ92820 318 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 GAREM1Q9H706 876 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
LITAF-221ENST00000622633 GPATCH2Q9NW75 528 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 SLCO1C1Q9NYB5 712 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 PTTG3PQ9NZH4 202 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 EXTL2Q9UBQ6 330 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 AP1M2Q9Y6Q5 423 aa11.74□□□□□ -0.53
LITAF-221ENST00000622633 MYOFQ9NZM1 2061 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 ANKDD1BA6NHY2 528 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 NEDD8-MDP1E9PL57 170 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 SAP18O00422 153 aaKnown RBP11.73□□□□□ -0.53
LITAF-221ENST00000622633 DPM1O60762 260 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 RASGRP1O95267 797 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 IMPA1P29218 277 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 PDHA2P29803 388 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 IDH2P48735 452 aaKnown RBP11.73□□□□□ -0.53
LITAF-221ENST00000622633 HBA1P69905 142 aa11.73□□□□□ -0.53
LITAF-221ENST00000622633 SNTB1Q13884 538 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms