RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
CBWD3-217ENST00000621474 POLEQ07864 2286 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 OR6C70A6NIJ9 312 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GSNP06396 782 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 UQCRC2P22695 453 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GABRA3P34903 492 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 RFC3P40938 356 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 CASP3P42574 277 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 DNASE1L1P49184 302 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 TDGF1P3P51864 188 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 RPS26P62854 115 aaKnown RBP13.13□□□□□ -0.31
CBWD3-217ENST00000621474 ZNHIT3Q15649 155 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-217ENST00000621474 CYP27C1Q4G0S4 372 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SAXO2Q658L1 398 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 TMEM81Q6P7N7 255 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SLC2A7Q6PXP3 512 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 MSANTD1Q6ZTZ1 278 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 C6orf120Q7Z4R8 191 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 ZFP62Q8NB50 900 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-217ENST00000621474 OR2M7Q8NG81 312 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 OR5D16Q8NGK9 328 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 FAR1Q8WVX9 515 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GTF2H4Q92759 462 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 DIO2Q92813 273 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SECISBP2Q96T21 854 aaKnown RBP13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SLX1AQ9BQ83 275 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 Q9N2J8 555 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 DUSP22Q9NRW4 184 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 TMEM45AQ9NWC5 275 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 FBXO34Q9NWN3 711 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GIN1Q9NXP7 522 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 FLRT3Q9NZU0 649 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 TRIM33Q9UPN9 1127 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 OR10H1Q9Y4A9 318 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 ANKRD33BA6NCL7 494 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 CCDC154A6NI56 674 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 TTC36A6NLP5 189 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 REM1O75628 298 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 CNR1P21554 472 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 DRD4P21917 467 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 MST1P26927 711 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 PRIM2P49643 509 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 CASP9P55211 416 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GNGT1P63211 74 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 PSPHP78330 225 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 MRPS22P82650 360 aaKnown RBP13.13□□□□□ -0.31
CBWD3-217ENST00000621474 LRRC74AQ0VAA2 488 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 IGFBP7Q16270 282 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SPDYE7PQ495Y7 208 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GTDC1Q4AE62 458 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 VPS26BQ4G0F5 336 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 AGKQ53H12 422 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 PAGE3Q5JUK9 113 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 FNDC7Q5VTL7 733 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 DNAJC14Q6Y2X3 702 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GK5Q6ZS86 529 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GALNT10Q86SR1 603 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 ZNF605Q86T29 641 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 FAM110BQ8TC76 370 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GPR151Q8TDV0 419 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 CDS1Q92903 461 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SPDL1Q96EA4 605 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 NEURL3Q96EH8 262 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 COL21A1Q96P44 957 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 STACQ99469 402 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SLC35A5Q9BS91 424 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 PIGUQ9H490 435 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 CNIH4Q9P003 139 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 SLAMF8Q9P0V8 285 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 PCDHGB4Q9UN71 923 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 HRH3Q9Y5N1 445 aa13.13□□□□□ -0.31
CBWD3-217ENST00000621474 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 CAPN14A8MX76 684 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 B4DXG7 233 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 KLRC4-KLRK1H3BQV0 150 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 NR5A2O00482 541 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 RFXANKO14593 260 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 GLSO94925 669 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-217ENST00000621474 KCNK2O95069 426 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 IL33O95760 270 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 P04436 131 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 CYP4B1P13584 511 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 PLA2G2AP14555 144 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 MVDP53602 400 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 UBAP2LQ14157 1087 aaKnown RBP13.12□□□□□ -0.31
CBWD3-217ENST00000621474 FAM180AQ6UWF9 173 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 NUP54Q7Z3B4 507 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 ZAR1Q86SH2 424 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 SIAH3Q8IW03 269 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 MIPOL1Q8TD10 442 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 ZFP90Q8TF47 636 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 NR4A3Q92570 626 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 JADE3Q92613 823 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-217ENST00000621474 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 OR7D2Q96RA2 312 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 FAM173AQ9BQD7 235 aa13.12□□□□□ -0.31
CBWD3-217ENST00000621474 ANGPTL4Q9BY76 406 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms