RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 RGS8P57771 180 aaPredicted RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 TARDBPQ13148 414 aaKnown RBP eCLIP9.29□□□□□ -0.92
VTA1-205ENST00000620996 LYSMD4Q5XG99 296 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 UBALD2Q8IYN6 164 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 OR4C15Q8NGM1 316 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 MAFAQ8NHW3 353 aaPredicted RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 ARSGQ96EG1 525 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 RBM18Q96H35 190 aaKnown RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 RHNO1Q9BSD3 238 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 RSPO3Q9BXY4 272 aaPredicted RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 TBCCD1Q9NVR7 557 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CPED1A4D0V7 1026 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 TMEM150CB9EJG8 249 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 FAM47E-STBD1D6RA91 191 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CYR61O00622 381 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 MED26O95402 600 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CFIP05156 583 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CT62P0C5K7 136 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 RNH1P13489 461 aaKnown RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 GABRA3P34903 492 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 UGT2B15P54855 530 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 SKP1P63208 163 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 ALDH6A1Q02252 535 aaKnown RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 TOP3AQ13472 1001 aaPredicted RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 IL18R1Q13478 541 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 RAB39AQ14964 217 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 SEC23BQ15437 767 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 TTLL10Q6ZVT0 673 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 AHSA2Q719I0 299 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 B3GNT8Q7Z7M8 397 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 ALDH16A1Q8IZ83 802 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 OR52R1Q8NGF1 315 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 PIGKQ92643 395 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 TANKQ92844 425 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 NODALQ96S42 347 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 YTHDF1Q9BYJ9 559 aaKnown RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 PCED1AQ9H1Q7 454 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 SLC38A1Q9H2H9 487 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CXorf21Q9HAI6 301 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 TBC1D23Q9NUY8 699 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CALML5Q9NZT1 146 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 TMEM9Q9P0T7 183 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 ERVK-18Q9QC07 812 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 PLCL2Q9UPR0 1127 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 LIPT1Q9Y234 373 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 MRPS33Q9Y291 106 aaKnown RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 TLCD2A6NGC4 264 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 LILRA5A6NI73 299 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 FADS2O95864 444 aaKnown RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 ACP2P11117 423 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 MAOAP21397 527 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 ELAVL4P26378 380 aaKnown RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 ARRB1P49407 418 aaPredicted RBP9.28□□□□□ -0.92
VTA1-205ENST00000620996 BTG2P78543 158 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 KEAP1Q14145 624 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 BCL2A1Q16548 175 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 MINDY4Q4G0A6 757 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 MANEAQ5SRI9 462 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 PRAMEF17Q5VTA0 474 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CDC73Q6P1J9 531 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 RRM2BQ7LG56 351 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 SLC38A6Q8IZM9 456 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CENPSQ8N2Z9 138 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 SUN5Q8TC36 379 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CLDN23Q96B33 292 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 GIMAP5Q96F15 307 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 PRTFDC1Q9NRG1 225 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CDC14AQ9UNH5 594 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 NTNG1Q9Y2I2 539 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 TPRKBQ9Y3C4 175 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CEPT1Q9Y6K0 416 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 CABIN1Q9Y6J0 2220 aa9.28□□□□□ -0.92
VTA1-205ENST00000620996 A8MUA0 341 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 SRPX2O60687 465 aaPredicted RBP9.27□□□□□ -0.92
VTA1-205ENST00000620996 CNOT3O75175 753 aaKnown RBP9.27□□□□□ -0.92
VTA1-205ENST00000620996 OR2B3O76000 313 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 IGFBP1P08833 259 aaPredicted RBP9.27□□□□□ -0.92
VTA1-205ENST00000620996 GNSP15586 552 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 OR1D4P47884 311 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 ALDH3B2P48448 385 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 ZNF267Q14586 743 aaPredicted RBP9.27□□□□□ -0.92
VTA1-205ENST00000620996 MAD2L1BPQ15013 274 aaPredicted RBP9.27□□□□□ -0.92
VTA1-205ENST00000620996 KCNJ8Q15842 424 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 ZNF628Q5EBL2 1059 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 DGAT2L6Q6ZPD8 337 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 PLEKHM3Q6ZWE6 761 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 SLC35F3Q8IY50 421 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 DNAJC22Q8N4W6 341 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 TRNT1Q96Q11 434 aaKnown RBP9.27□□□□□ -0.92
VTA1-205ENST00000620996 PTGFRNQ9P2B2 879 aa9.27□□□□□ -0.92
VTA1-205ENST00000620996 GPR55Q9Y2T6 319 aaPredicted RBP9.27□□□□□ -0.92
VTA1-205ENST00000620996 SPEGQ15772 3267 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 ZSCAN5BA6NJL1 495 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 AP3D1O14617 1153 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 DUX1O43812 170 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 ABCB7O75027 752 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 SEMA7AO75326 666 aa9.27□□□□□ -0.93
VTA1-205ENST00000620996 IFNA8P32881 189 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms