RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ILF3Q12906 894 aaKnown RBP eCLIP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TRAF2Q12933 501 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TMEM132DQ14C87 1099 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TGFBIQ15582 683 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 FAM83EQ2M2I3 478 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SPANXN2Q5MJ10 180 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CARD17Q5XLA6 110 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SPECC1LQ69YQ0 1117 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SNRNP48Q6IEG0 339 aaKnown RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CDC42EP5Q6NZY7 148 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SYT10Q6XYQ8 523 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ZNF771Q7L3S4 317 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 FAM131BQ86XD5 332 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 LRRC8AQ8IWT6 810 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 GPC2Q8N158 579 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 FNDC5Q8NAU1 212 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 OR6M1Q8NGM8 313 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 NDNFQ8TB73 568 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CD300LFQ8TDQ1 290 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 RTP4Q96DX8 246 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 C2orf48Q96LS8 159 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 S1PR3Q99500 378 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 HINT2Q9BX68 163 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 GANQ9H2C0 597 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TMEM185BQ9H7F4 350 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 UCK1Q9HA47 277 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 FLRT3Q9NZU0 649 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ZNF319Q9P2F9 582 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 PEF1Q9UBV8 284 aaKnown RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 POFUT2Q9Y2G5 429 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 MRPS7Q9Y2R9 242 aaKnown RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 RBMX2Q9Y388 322 aaKnown RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 USP16Q9Y5T5 823 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 A0A087WUV0 522 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 A0A087WZ39 114 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 A0A0U1RQS6 177 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TMEM120BA0PK00 339 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 PDXKO00764 312 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 GLRA3O75311 464 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CDK2AP2O75956 126 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 LCA5LO95447 670 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 NADKO95544 446 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 OPN1LWP04000 364 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CAPN1P07384 714 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SFTPBP07988 381 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 NGFRP08138 427 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CT45A8P0DMV1 189 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CT45A9P0DMV2 189 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 PNMTP11086 282 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CPN1P15169 458 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SELEP16581 610 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 GLRA1P23415 457 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 OXTRP30559 389 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 MMP12P39900 470 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TPMTP51580 245 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 DVL1P1P54792 670 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ATP5IP56385 69 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 NANOS3P60323 173 aaKnown RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CBX1P83916 185 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 GABPAQ06546 454 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 IL18Q14116 193 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 PDK3Q15120 406 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 OR1C1Q15619 314 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SGCAQ16586 387 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 PARP6Q2NL67 630 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 KIF19Q2TAC6 998 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CT45A2Q5DJT8 189 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CLVS2Q5SYC1 327 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 C6orf183Q5T699 404 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 DCAF12Q5T6F0 453 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 RNLSQ5VYX0 342 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CAPN13Q6MZZ7 669 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ITIH5Q86UX2 942 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 LRRC6Q86X45 466 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CACUL1Q86Y37 369 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 LRRC75A-AS1Q8N1F1 130 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 UBE2J2Q8N2K1 259 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 DNAAF3Q8N9W5 541 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ERMNQ8TAM6 284 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 FAM76AQ8TAV0 307 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TMEM143Q96AN5 459 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SENP8Q96LD8 212 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ZNF354BQ96LW1 612 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CASD1Q96PB1 797 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TEKT3Q9BXF9 490 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 TRIM9Q9C026 710 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 OPN3Q9H1Y3 402 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 MRM3Q9HC36 420 aaKnown RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ZBTB20Q9HC78 741 aaPredicted RBP3.36□□□□□ -1.87
LRRC39-204ENST00000620882 APMAPQ9HDC9 416 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 HACD3Q9P035 362 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 EMC3Q9P0I2 261 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 SENP1Q9P0U3 644 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 POLKQ9UBT6 870 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 CD300AQ9UGN4 299 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 ATPIF1Q9UII2 106 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 STAP1Q9ULZ2 295 aa3.36□□□□□ -1.87
LRRC39-204ENST00000620882 LMO7DNF2Z398 122 aa3.35□□□□□ -1.87
LRRC39-204ENST00000620882 SIGLEC5O15389 551 aa3.35□□□□□ -1.87
LRRC39-204ENST00000620882 CDK14O94921 469 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms