RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	SEC14L3	Q9UDX4	400 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	SLC2A6	Q9UGQ3	507 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	RUVBL1	Q9Y265	456 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ANK2	Q01484	3957 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322		A0A1W2PPW3	197 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322		K7EM74	188 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	RGS14	O43566	566 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	TRIM13	O60858	407 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	KRT75	O95678	551 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	RNASE1	P07998	156 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	C8orf89	P0DMQ9	161 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	RNH1	P13489	461 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ASPH	Q12797	758 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	CSTF3	Q12996	717 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZMYND11	Q15326	602 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	TGIF1	Q15583	401 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZNF766	Q5HY98	468 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	OR2A2	Q6IF42	318 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZNF549	Q6P9A3	640 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	FRMD7	Q6ZUT3	714 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	TRAPPC5	Q8IUR0	188 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MARVELD2	Q8N4S9	558 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	CSNK1A1L	Q8N752	337 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	CCNY	Q8ND76	341 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	OR2L5	Q8NG80	312 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	OR6K2	Q8NGY2	324 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	AGR3	Q8TD06	166 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MTERF3	Q96E29	417 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	FBXL20	Q96IG2	436 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	WAC	Q9BTA9	647 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZNF717	Q9BY31	904 aa	Predicted RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	PROK2	Q9HC23	129 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZBTB26	Q9HCK0	441 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	TNFRSF12A	Q9NP84	129 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MRPS30	Q9NP92	439 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	PLA2G2D	Q9UNK4	145 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ATG4B	Q9Y4P1	393 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	UGT2A1	Q9Y4X1	527 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ARL5A	Q9Y689	179 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322		A0A096LNT2	108 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	FRG2C	A6NGY1	282 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322		H0YGG7	62 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	NUPL2	O15504	423 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	SS18L1	O75177	396 aa	Predicted RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	JUN	P05412	331 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	F7	P08709	466 aa	Predicted RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	NT5E	P21589	574 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MST1	P26927	711 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	IFNA8	P32881	189 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	RGS4	P49798	205 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	CDK9	P50750	372 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	IST1	P53990	364 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	EMP2	P54851	167 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ALDH18A1	P54886	795 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ARF3	P61204	181 aa	Predicted RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MRPS11	P82912	194 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	OCA2	Q04671	838 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	CYP27C1	Q4G0S4	372 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZNF627	Q7L945	461 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	TAS2R42	Q7RTR8	314 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZNF480	Q8WV37	535 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	OR52B2	Q96RD2	323 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MRPL57	Q9BQC6	102 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MS4A8	Q9BY19	250 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	SPRTN	Q9H040	489 aa	Predicted RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	S100A14	Q9HCY8	104 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	IARS2	Q9NSE4	1012 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	MBNL3	Q9NUK0	354 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	GIMAP4	Q9NUV9	329 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	FAIM	Q9NVQ4	179 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	NDE1	Q9NXR1	346 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	DHCR7	Q9UBM7	475 aa	Known RBP	4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	FBLN5	Q9UBX5	448 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ZDHHC2	Q9UIJ5	367 aa		4.97	□□□□□ -1.61
CBWD3-215	ENST00000619322	ASH1L	Q9NR48	2969 aa	Known RBP	4.96	□□□□□ -1.61
CBWD3-215	ENST00000619322	SCN2A	Q99250	2005 aa		4.96	□□□□□ -1.61
CBWD3-215	ENST00000619322	RP1	P56715	2156 aa		4.96	□□□□□ -1.61
CBWD3-215	ENST00000619322		F5H423	210 aa	Predicted RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ACOT8	O14734	319 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	FKBP6	O75344	327 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	TBX6	O95947	436 aa	Predicted RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	CGA	P01215	116 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	RAF1	P04049	648 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	CHRNG	P07510	517 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	DBT	P11182	482 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	COX4I1	P13073	169 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	NPPB	P16860	134 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ALDH4A1	P30038	563 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	YAP1	P46937	504 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	CLK1	P49759	484 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	RPL14	P50914	215 aa	Known RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	ATP4B	P51164	291 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	MAX	P61244	160 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	POU6F2	P78424	691 aa	Predicted RBP	4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	RGS1	Q08116	209 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	KLF10	Q13118	480 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	EFR3A	Q14156	821 aa		4.96	□□□□□ -1.62
CBWD3-215	ENST00000619322	GSTA3	Q16772	222 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 78 ms