RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 BTN2A3PQ96KV6 586 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 CMTM3Q96MX0 182 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 SIX3O95343 332 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-208ENST00000618395 C1QBP02746 253 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 ELK1P19419 428 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 CSNK2A2P19784 350 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-208ENST00000618395 CEBPEQ15744 281 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 TAF9Q16594 264 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 TTYH3Q9C0H2 523 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 DKKL1Q9UK85 242 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 FBXL2Q9UKC9 423 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 MT-CYBP00156 380 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-208ENST00000618395 KLK1P06870 262 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 OR8U1Q8NH10 309 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 SORBS1Q9BX66 1292 aaKnown RBP14.32□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM59LQ9UK28 342 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 DOCK11Q5JSL3 2073 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 MYO3AQ8NEV4 1616 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 SMLR1H3BR10 107 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 PHYHO14832 338 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 CACNG3O60359 315 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 PCCBP05166 539 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 ITPRIPL2Q3MIP1 535 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 HEPHL1Q6MZM0 1159 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 ABHD13Q7L211 337 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 LSMEM2Q8N112 164 aa14.32□□□□□ -0.12
COL5A1-208ENST00000618395 A0A1W2PQ67 120 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 H2BFMP0C1H6 154 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 ADIRFQ15847 76 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 NLRC3Q7RTR2 1065 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 OR5W2Q8NH69 310 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 PIGQQ9BRB3 760 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 BOLA1Q9Y3E2 137 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 THBS1P07996 1170 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 FGF7P21781 194 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 MEOX2P50222 304 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 TMEM183BQ1AE95 376 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 MSTNO14793 375 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 CYB5BO43169 146 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF780AO75290 641 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 SPP1P10451 314 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 DPYSL2Q16555 572 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 MINDY4Q4G0A6 757 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 C18orf63Q68DL7 685 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 JSRP1Q96MG2 331 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 V9GYS6 101 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 TBC1D3BA6NDS4 549 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 C6P13671 934 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 GCGRP47871 477 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 HNRNPDQ14103 355 aaKnown RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 SMYD5Q6GMV2 418 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 OR6T1Q8NGN1 323 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 SLC17A6Q9P2U8 582 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 CLRN1P58418 232 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 IFI44Q8TCB0 444 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 KREMEN1Q96MU8 473 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 ALG8Q9BVK2 526 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 LIN7CQ9NUP9 197 aaKnown RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 PPLO60437 1756 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 KDELR3O43731 214 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 SLC43A1O75387 559 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 CLPPQ16740 277 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 CADM3Q8N126 398 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 TRAM1L1Q8N609 369 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 JOSD2Q8TAC2 188 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 SFXN5Q8TD22 340 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 LMLNQ96KR4 655 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 KCNQ5Q9NR82 932 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 MEGF11A6BM72 1044 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 M0QZK8 103 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 GGCTO75223 188 aaKnown RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 CDK14O94921 469 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 ADRA1BP35368 520 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 HTR4Q13639 388 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 IRF4Q15306 451 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 BCL7CQ8WUZ0 217 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 NRG4Q8WWG1 115 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 MSI2Q96DH6 328 aaKnown RBP14.31□□□□□ -0.12
COL5A1-208ENST00000618395 SEMA4CQ9C0C4 833 aa14.31□□□□□ -0.12
COL5A1-208ENST00000618395 CD48P09326 243 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 KITLGP21583 273 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CXCR4P61073 352 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 SLC10A1Q14973 349 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 OR5AK2Q8NH90 309 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 BBS10Q8TAM1 723 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 GPR22Q99680 433 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 METTL15A6NJ78 407 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 RAF1P04049 648 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 NAA10P41227 235 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 FXYD4P59646 89 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 CCNJQ5T5M9 372 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 MRPL38Q96DV4 380 aaKnown RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 FAM46AQ96IP4 442 aaKnown RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 LMF1Q96S06 567 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 ESRP2Q9H6T0 727 aaKnown RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 ZNF442Q9H7R0 627 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 ASGR1P07306 291 aa14.3□□□□□ -0.12
COL5A1-208ENST00000618395 TRHRP34981 398 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 PCBP1Q15365 356 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL5A1-208ENST00000618395 RELTQ969Z4 430 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms