RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 MGAT4BQ9UQ53 548 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 CHST2Q9Y4C5 530 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 A0A087WUU8 490 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 A0A0G2JPF8 293 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 SPTY2D1-AS1A0A0U1RR47 76 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 A8MVJ9 347 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 HNRNPCL2B2RXH8 293 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 HNRNPCL3B7ZW38 293 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 CCNYL3P0C7X3 344 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 GKN3PP0CG01 181 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 HNRNPCL4P0DMR1 293 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 CDH3P22223 829 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 ACVR2AP27037 513 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 IDUAP35475 653 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 MAN2A2P49641 1150 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 GINS1Q14691 196 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 MOGQ16653 247 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 KIAA0895LQ68EN5 471 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 ACSM5Q6NUN0 579 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 FAM92BQ6ZTR7 304 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 ABHD13Q7L211 337 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 NKAIN4Q8IVV8 208 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 SLC34A3Q8N130 599 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 CSNK1A1LQ8N752 337 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 SERINC2Q96SA4 455 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 TTYH1Q9H313 450 aaPredicted RBP11.61□□□□□ -0.55
CIITA-212ENST00000618207 TBC1D23Q9NUY8 699 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 WDR45Q9Y484 360 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 URADA6NGE7 173 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 SDC3O75056 442 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 GAS6Q14393 721 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 UBXN2BQ14CS0 331 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 FAM214AQ32MH5 1076 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 ZNF829Q3KNS6 432 aaPredicted RBP11.6□□□□□ -0.55
CIITA-212ENST00000618207 FBXO43Q4G163 708 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 MFSD12Q6NUT3 480 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 ARMC6Q6NXE6 501 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 PAQR6Q6TCH4 344 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 ZNF730Q6ZMV8 503 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 PRICKLE2Q7Z3G6 844 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 ABI3BPQ7Z7G0 1075 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 SFXN5Q8TD22 340 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 GPBAR1Q8TDU6 330 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 ZDHHC1Q8WTX9 485 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 OTULINQ96BN8 352 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 TM4SF19Q96DZ7 209 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 KLHDC7BQ96G42 594 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 LMAN1LQ9HAT1 526 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 PILRAQ9UKJ1 303 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 BOLA2-SMG1P6H3BVE0 249 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 PRKYO43930 277 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 CNOT3O75175 753 aaKnown RBP11.6□□□□□ -0.55
CIITA-212ENST00000618207 CPMP14384 443 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 PORP16435 677 aaPredicted RBP11.6□□□□□ -0.55
CIITA-212ENST00000618207 GPR4P46093 362 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 INAVAQ3KP66 663 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 PERM1Q5SV97 790 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 TSTD1Q8NFU3 115 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 BAHD1Q8TBE0 780 aaPredicted RBP11.6□□□□□ -0.55
CIITA-212ENST00000618207 SLC38A4Q969I6 547 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 BORCS5Q969J3 196 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 USP36Q9P275 1121 aaKnown RBP11.6□□□□□ -0.55
CIITA-212ENST00000618207 PHF11Q9UIL8 331 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 DOLKQ9UPQ8 538 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 CARD8Q9Y2G2 431 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 HS3ST3A1Q9Y663 406 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 PMF1-BGLAPU3KQ54 211 aa11.6□□□□□ -0.55
CIITA-212ENST00000618207 KRBA1A5PL33 1030 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 FAM170BA6NMN3 283 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SLC22A1O15245 554 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 INHBBP09529 407 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 CT62P0C5K7 136 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 TSFMP43897 325 aaKnown RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 CSNK2BP67870 215 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 ILKQ13418 452 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 GNA13Q14344 377 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 TBCEQ15813 527 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 NNATQ16517 81 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SNAPC1Q16533 368 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 TSTQ16762 297 aaKnown RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 ENTPD8Q5MY95 495 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 CHRDL2Q6WN34 429 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 PLEKHM3Q6ZWE6 761 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SHFQ7M4L6 423 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 PARGQ86W56 976 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 OOSP2Q86WS3 158 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 NT5CQ8TCD5 201 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 GPR151Q8TDV0 419 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 PRRC1Q96M27 445 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 MCHR1Q99705 422 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 DCSTAMPQ9H295 470 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 BCL2L10Q9HD36 194 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 EXOSC4Q9NPD3 245 aaKnown RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 PLCXD1Q9NUJ7 323 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 POT1Q9NUX5 634 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 WSB2Q9NYS7 404 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 HCN3Q9P1Z3 774 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 SLC22A7Q9Y694 548 aa11.59□□□□□ -0.55
CIITA-212ENST00000618207 A0A0A6YYC8 382 aaPredicted RBP11.59□□□□□ -0.55
CIITA-212ENST00000618207 A0A1W2PRQ8 180 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms