RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 GRK2P25098 689 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 TIA1P31483 386 aaKnown RBP eCLIP18.82■□□□□ 0.66e-9■■□□□ 12.1
TRAPPC3-208ENST00000616074 KRT20P35900 424 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 ACSM2AQ08AH3 577 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 HEPACAMQ14CZ8 416 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 SPIN4Q56A73 249 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 ACSM2BQ68CK6 577 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 GRAMD2AQ8IUY3 354 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 SAMD14Q8IZD0 417 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 GBP7Q8N8V2 638 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 WFDC11Q8NEX6 87 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 OR7G2Q8NG99 324 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 OR4N2Q8NGD1 307 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 EFHD2Q96C19 240 aaPredicted RBP18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 MTBPQ96DY7 904 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 EBPLQ9BY08 206 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 ACBD3Q9H3P7 528 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 PIGMQ9H3S5 423 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 SLC35C2Q9NQQ7 365 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 GIMAP4Q9NUV9 329 aa18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 MRPS18CQ9Y3D5 142 aaKnown RBP18.82■□□□□ 0.6
TRAPPC3-208ENST00000616074 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 HCRTR2O43614 444 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 ZIC3O60481 467 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 PLOD3O60568 738 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 TNFSF13O75888 250 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 TGM6O95932 706 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 IMPDH1P20839 514 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 CHMP24386 653 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 PNLIPRP2P54317 469 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 GAB1Q13480 694 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 SCIMPQ6UWF3 145 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 TIFABQ6ZNK6 161 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 SLC44A2Q8IWA5 706 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 FAM9CQ8IZT9 166 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 DTNBP1Q96EV8 351 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 C11orf24Q96F05 449 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 KCNA7Q96RP8 456 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 SENP1Q9P0U3 644 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 PACSIN3Q9UKS6 424 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 TIMM22Q9Y584 194 aa18.81■□□□□ 0.6
TRAPPC3-208ENST00000616074 A8MXE2 369 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 FOSL1P15407 271 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 ATP5F1P24539 256 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 DPP4P27487 766 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 B3GALT5-AS1P59052 145 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 PSPHP78330 225 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 BTKQ06187 659 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 LGSNQ5TDP6 509 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 GALNT18Q6P9A2 607 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 TAS2R9Q9NYW1 312 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 OR10H1Q9Y4A9 318 aa18.8■□□□□ 0.6
TRAPPC3-208ENST00000616074 A0A1W2PNV4 684 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 SCO2O43819 266 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 ENO1P06733 434 aaKnown RBP18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 CD53P19397 219 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 CPOXP36551 454 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 PRKAA2P54646 552 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 DIO3P55073 304 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 PSG6Q00889 435 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 ZNF155Q12901 538 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 LCP2Q13094 533 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 PRSS53Q2L4Q9 553 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 OR4K17Q8NGC6 315 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 SMPDL3BQ92485 455 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 L3HYPDHQ96EM0 354 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 STMN4Q9H169 189 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 PPP4R1LQ9P1A2 415 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 STK38LQ9Y2H1 464 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 PCNX3Q9H6A9 2034 aa18.79■□□□□ 0.6
TRAPPC3-208ENST00000616074 ABHD2P08910 425 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 ANXA4P09525 319 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 HOXC12P31275 282 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 EVI2BP34910 448 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 MPIP34949 423 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 PKNOX1P55347 436 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 DSCR4P56555 118 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 BCL2A1Q16548 175 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 SH2D4BQ5SQS7 431 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 P4HA3Q7Z4N8 544 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 LCA5Q86VQ0 697 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 KRTAP1-3Q8IUG1 177 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 SLC22A9Q8IVM8 553 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 UBQLNLQ8IYU4 475 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 FADS6Q8N9I5 356 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 CDC26Q8NHZ8 85 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 BBS4Q96RK4 519 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 DSN1Q9H410 356 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 SIRT5Q9NXA8 310 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 FLRT3Q9NZU0 649 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 NFU1Q9UMS0 254 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 TESMINQ9Y4I5 508 aa18.78■□□□□ 0.6
TRAPPC3-208ENST00000616074 MYO1GB0I1T2 1018 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 GOLGA8RI6L899 631 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 COQ9O75208 318 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 JUNP05412 331 aaKnown RBP18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 DDCP20711 480 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 MC3RP41968 323 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 GSTM5P46439 218 aa18.77■□□□□ 0.6
TRAPPC3-208ENST00000616074 NCBP2P52298 156 aaKnown RBP eCLIP18.77■□□□□ 0.61e-7■■■□□ 16.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms